RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PROX1Q92786 737 aa12.12□□□□□ -0.47
VARS-226ENST00000483275 AURKBQ96GD4 344 aaPredicted RBP12.12□□□□□ -0.47
VARS-226ENST00000483275 NAA11Q9BSU3 229 aaPredicted RBP12.12□□□□□ -0.47
VARS-226ENST00000483275 NUF2Q9BZD4 464 aa12.12□□□□□ -0.47
VARS-226ENST00000483275 ADPRHL2Q9NX46 363 aa12.12□□□□□ -0.47
VARS-226ENST00000483275 KCNS2Q9ULS6 477 aa12.12□□□□□ -0.47
VARS-226ENST00000483275 TRAPPC4Q9Y296 219 aa12.12□□□□□ -0.47
VARS-226ENST00000483275 FKBP7Q9Y680 259 aa12.12□□□□□ -0.47
VARS-226ENST00000483275 PMF1-BGLAPU3KQ54 211 aa12.12□□□□□ -0.47
VARS-226ENST00000483275 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 CFAP73A6NFT4 308 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 E9PBE3 544 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
VARS-226ENST00000483275 CELA3BP08861 270 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 ALDOCP09972 364 aaKnown RBP12.11□□□□□ -0.47
VARS-226ENST00000483275 IL12AP29459 219 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 SLC1A3P43003 542 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 HTR3AP46098 478 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
VARS-226ENST00000483275 GZMKP49863 264 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 SELENOPP49908 381 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 ABCE1P61221 599 aaKnown RBP12.11□□□□□ -0.47
VARS-226ENST00000483275 UFM1P61960 85 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
VARS-226ENST00000483275 TGFBR3Q03167 851 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 EPS8Q12929 822 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 IQCCQ4KMZ1 466 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 CEP85LQ5SZL2 805 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 ANXA8L1Q5VT79 327 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 VRK2Q86Y07 508 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 CADM2Q8N3J6 435 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 TESCQ96BS2 214 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 SLC38A2Q96QD8 506 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 SORT1Q99523 831 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 BPESC1Q9GZL8 116 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 SLC6A13Q9NSD5 602 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 PARPBPQ9NWS1 579 aa12.11□□□□□ -0.47
VARS-226ENST00000483275 CCDC154A6NI56 674 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 AQP7P3A6NL99 342 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 ZNF208O43345 1280 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 UPK3AO75631 287 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 KRT33AO76009 404 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 WNT11O96014 354 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 SERPINE1P05121 402 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 GUSBP08236 651 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 OR4A8P0C604 315 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 NR2F1P10589 423 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 BMP4P12644 408 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 PRG2P13727 222 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 IL7RP16871 459 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 RPS4Y1P22090 263 aaKnown RBP12.1□□□□□ -0.47
VARS-226ENST00000483275 CALCRP30988 508 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 IL2RGP31785 369 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 S100A3P33764 101 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 MAPK11Q15759 364 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 TBRG1Q3YBR2 411 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 RPS26P11Q5JNZ5 115 aaPredicted RBP12.1□□□□□ -0.47
VARS-226ENST00000483275 ZNF836Q6ZNA1 936 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 ZCCHC24Q8N2G6 241 aaKnown RBP12.1□□□□□ -0.47
VARS-226ENST00000483275 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 TMEM45BQ96B21 275 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 C1orf159Q96HA4 380 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 CCDC115Q96NT0 180 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 TRNT1Q96Q11 434 aaKnown RBP12.1□□□□□ -0.47
VARS-226ENST00000483275 KCNS3Q9BQ31 491 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 CA10Q9NS85 328 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 PNPOQ9NVS9 261 aa12.1□□□□□ -0.47
VARS-226ENST00000483275 ZNF587BE7ETH6 402 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 FRS3O43559 492 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 SEC14L2O76054 403 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 TGFAP01135 160 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 GPIP06744 558 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 CECR9P0C854 216 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 BGNP21810 368 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 SERPINF1P36955 418 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 P2RY4P51582 365 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 SMU1Q2TAY7 513 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 CR1LQ2VPA4 569 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 NIPAL3Q6P499 406 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 ZNF621Q6ZSS3 439 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 HOMEZQ8IX15 550 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 KDM8Q8N371 416 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 POMGNT2Q8NAT1 580 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 VPS37AQ8NEZ2 397 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 PANX1Q96RD7 426 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 NELFAQ9H3P2 528 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 SEC14L4Q9UDX3 406 aa12.09□□□□□ -0.47
VARS-226ENST00000483275 ZNF503-AS2A6NEH8 195 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 ETFAP13804 333 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 LBPP18428 481 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 CXCR1P25024 350 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 FKBP2P26885 142 aaKnown RBP12.08□□□□□ -0.48
VARS-226ENST00000483275 ACAA2P42765 397 aaKnown RBP12.08□□□□□ -0.48
VARS-226ENST00000483275 SLC1A6P48664 564 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 CLNS1AP54105 237 aaKnown RBP12.08□□□□□ -0.48
VARS-226ENST00000483275 UBE2NP61088 152 aaKnown RBP12.08□□□□□ -0.48
VARS-226ENST00000483275 HOXC5Q00444 222 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms