RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PIGTQ969N2 578 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 TMEM45BQ96B21 275 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 SH3GL1Q99961 368 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 TMEM204Q9BSN7 226 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 RSPO3Q9BXY4 272 aaPredicted RBP10.5□□□□□ -0.73
HMGN1-213ENST00000482192 PIF1Q9H611 641 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 ESRP2Q9H6T0 727 aaKnown RBP10.5□□□□□ -0.73
HMGN1-213ENST00000482192 SAR1AQ9NR31 198 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 ASB6Q9NWX5 421 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 KLHL14Q9P2G3 628 aa10.5□□□□□ -0.73
HMGN1-213ENST00000482192 OR5H1A6NKK0 313 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 FTCDNL1E5RQL4 147 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 MRASO14807 208 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 ATP8B1O43520 1251 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 VAMP5O95183 116 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 NPPAP01160 153 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 GTF2E2P29084 291 aaKnown RBP10.49□□□□□ -0.73
HMGN1-213ENST00000482192 PCGF2P35227 344 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 MDH1P40925 334 aaKnown RBP10.49□□□□□ -0.73
HMGN1-213ENST00000482192 RPS5P46782 204 aaKnown RBP10.49□□□□□ -0.73
HMGN1-213ENST00000482192 EGR4Q05215 589 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 DMTNQ08495 405 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 SF3A3Q12874 501 aaKnown RBP eCLIP10.49□□□□□ -0.736e-7■□□□□ 11.3
HMGN1-213ENST00000482192 STK11Q15831 433 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 MMEL1Q495T6 779 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 INTS11Q5TA45 600 aaKnown RBP10.49□□□□□ -0.73
HMGN1-213ENST00000482192 FAM91A1Q658Y4 838 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 PATL1Q86TB9 770 aaKnown RBP10.49□□□□□ -0.73
HMGN1-213ENST00000482192 GPAT4Q86UL3 456 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 ZNF433Q8N7K0 673 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-213ENST00000482192 OR8J3Q8NGG0 315 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 OR10A6Q8NH74 314 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 LRRC58Q96CX6 371 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 MUCL1Q96DR8 90 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 CCL19Q99731 98 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 PIP5K1AQ99755 562 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 PTDSS2Q9BVG9 487 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 TMEM27Q9HBJ8 222 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 TAS2R16Q9NYV7 291 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 SELENONQ9NZV5 590 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 TACC2O95359 2948 aa10.49□□□□□ -0.73
HMGN1-213ENST00000482192 CIB4A0PJX0 185 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 CCT8L1PA6NM43 557 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 M0QX08 132 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 FXYD1O00168 92 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SLC22A2O15244 555 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 OR2T1O43869 369 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 RAD51DO75771 328 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 C8BP07358 591 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 CD3EP07766 207 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 P2RY4P51582 365 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 FAPQ12884 760 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 PPA1Q15181 289 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 VMACQ2NL98 169 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 NCMAPQ5T1S8 102 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SWT1Q5T5J6 900 aaKnown RBP10.48□□□□□ -0.73
HMGN1-213ENST00000482192 REP15Q6BDI9 236 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 OR7E24Q6IFN5 339 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 NANOGP8Q6NSW7 305 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SEZ6L2Q6UXD5 910 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 AAED1Q7RTV5 226 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SNX32Q86XE0 403 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 TGIF2LYQ8IUE0 185 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SMYD1Q8NB12 490 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 PCYOX1LQ8NBM8 494 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SLC38A4Q969I6 547 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SLC25A36Q96CQ1 311 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 KTI12Q96EK9 354 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-213ENST00000482192 SLC47A1Q96FL8 570 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 ZNF385AQ96PM9 386 aaKnown RBP10.48□□□□□ -0.73
HMGN1-213ENST00000482192 PRR14Q9BWN1 585 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 NANOGQ9H9S0 305 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 UPB1Q9UBR1 384 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 RASD1Q9Y272 281 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 CAPN7Q9Y6W3 813 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 CCDC168Q8NDH2 2452 aa10.48□□□□□ -0.73
HMGN1-213ENST00000482192 IGKV1D-42A0A075B6H8 117 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 TRAV36DV7A0A075B6V5 113 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 A0A087WUJ7 227 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 A0A0B4J2E0 115 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 A0A1B0GX12 115 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 PDLIM1O00151 329 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 HS3ST1O14792 307 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 CLOCKO15516 846 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 FMO6PO60774 539 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 SMPD2O60906 423 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 FZD7O75084 574 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 LGI1O95970 557 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 OPN1SWP03999 348 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 CD99P14209 185 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 GZMMP51124 257 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 ADAM8P78325 824 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 TGFBR3Q03167 851 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 BSPH1Q075Z2 132 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 OR1Q1Q15612 314 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 DUSP7Q16829 419 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 RABL3Q5HYI8 236 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 FAM69AQ5T7M9 428 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 TSPO2Q5TGU0 170 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms