RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TAPBPLQ9BX59 468 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 HDHD5Q9BXW7 423 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 SLC19A3Q9BZV2 496 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 NDRG3Q9UGV2 375 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 TACC2O95359 2948 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 TRAPPC13A5PLN9 417 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 HTR3EA5X5Y0 456 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 AQP7P3A6NL99 342 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 C16orf97H3BN30 126 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 AHSA1O95433 338 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 OPN1SWP03999 348 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 HSD17B1P14061 328 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 CCNA2P20248 432 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 PSMB1P20618 241 aaKnown RBP13.75□□□□□ -0.21
C9orf3-217ENST00000479161 CEACAM7Q14002 265 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 SLC17A1Q14916 467 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 P2RY6Q15077 328 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 POU4F3Q15319 338 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 NPTX1Q15818 432 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 CYBRD1Q53TN4 286 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 ENTPD8Q5MY95 495 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 C1QTNF12Q5T7M4 302 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 PPP4R4Q6NUP7 873 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 TFAP2EQ6VUC0 442 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 SSX8Q7RTT4 187 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 ADPRHL1Q8NDY3 354 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 ADAMTS16Q8TE57 1224 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 PTDSS2Q9BVG9 487 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 OPN3Q9H1Y3 402 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-217ENST00000479161 MCCC2Q9HCC0 563 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 PARPBPQ9NWS1 579 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 USP22Q9UPT9 525 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 B3GALT5Q9Y2C3 310 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 GPR52Q9Y2T5 361 aa13.75□□□□□ -0.21
C9orf3-217ENST00000479161 SPG11Q96JI7 2443 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 IGKV1D-42A0A075B6H8 117 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 TRAV36DV7A0A075B6V5 113 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 CXCR6O00574 342 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 POU2F1P14859 743 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 UGT2B10P36537 528 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 P2RY4P51582 365 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 CDH12P55289 794 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 BNIP2Q12982 314 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 Q6ZT83 130 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 CBLL1Q75N03 491 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 GABRG1Q8N1C3 465 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 ARHGAP24Q8N264 748 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 OR4D11Q8NGI4 311 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 TMEM45BQ96B21 275 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 KCTD14Q9BQ13 255 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-217ENST00000479161 GORASP2Q9H8Y8 452 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 ADPRHL2Q9NX46 363 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 CLEC4AQ9UMR7 237 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 RASD1Q9Y272 281 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 SH3GLB1Q9Y371 365 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 CORINQ9Y5Q5 1042 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 FBN2P35556 2912 aa13.74□□□□□ -0.21
C9orf3-217ENST00000479161 IGHV3-15A0A0B4J1V0 119 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 M0R3H8 397 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 OR5F1O95221 314 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 LYPD3O95274 346 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 MT-ATP6P00846 226 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 GGT1P19440 569 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 FAM27E3Q08E93 113 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 OR7A5Q15622 319 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 SAMD4BQ5PRF9 694 aaKnown RBP13.73□□□□□ -0.21
C9orf3-217ENST00000479161 OTUD3Q5T2D3 398 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-217ENST00000479161 C16orf89Q6UX73 402 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 NUFIP2Q7Z417 695 aaKnown RBP13.73□□□□□ -0.21
C9orf3-217ENST00000479161 CARM1Q86X55 608 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 SCAIQ8N9R8 606 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 KTI12Q96EK9 354 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-217ENST00000479161 SLC41A3Q96GZ6 507 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 NSL1Q96IY1 281 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 CRIM1Q9NZV1 1036 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 CD300AQ9UGN4 299 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 FLVCR1Q9Y5Y0 555 aa13.73□□□□□ -0.21
C9orf3-217ENST00000479161 MYO9AB2RTY4 2548 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 ALPK2Q86TB3 2170 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 OR6C65A6NJZ3 312 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 ZNF814B7Z6K7 855 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 GSTA4O15217 222 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 PRF1P14222 555 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 KLK2P20151 261 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 CALB2P22676 271 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 RBM34P42696 430 aaKnown RBP13.72□□□□□ -0.21
C9orf3-217ENST00000479161 LRRC23Q53EV4 343 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-217ENST00000479161 TMEM225Q6GV28 225 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 STAC2Q6ZMT1 411 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 RBM45Q8IUH3 476 aaKnown RBP13.72□□□□□ -0.21
C9orf3-217ENST00000479161 CCDC103Q8IW40 242 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 TMEM99Q8N816 258 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 TAAR8Q969N4 342 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 HS6ST2Q96MM7 605 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 ZNF300Q96RE9 604 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-217ENST00000479161 PRR14Q9BWN1 585 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 C1orf21Q9H246 121 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 RPS6KA6Q9UK32 745 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 NOSIPQ9Y314 301 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms