RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 P04436 131 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 ZNF43P17038 809 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 TNNI1P19237 187 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 GDF1P27539 372 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 HTR1FP30939 366 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 SYKP43405 635 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 KPNA2P52292 529 aaKnown RBP3.87□□□□□ -1.79
UPF3B-203ENST00000478840 CDH6P55285 790 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 BIDP55957 195 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 NSUN5P1Q3KNT7 163 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 MARCH9Q86YJ5 346 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 HPS6Q86YV9 775 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 KLHL30-AS1Q8NEE0 82 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 CCDC148Q8NFR7 591 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 OR2L2Q8NH16 312 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 AGR3Q8TD06 166 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 PAGE5Q96GU1 130 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 KIR2DL4Q99706 377 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 GAL3ST1Q99999 423 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 CENPKQ9BS16 269 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 FAIM2Q9BWQ8 316 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 SUDS3Q9H7L9 328 aaPredicted RBP3.87□□□□□ -1.79
UPF3B-203ENST00000478840 FOLH1BQ9HBA9 442 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 THUMPD1Q9NXG2 353 aaKnown RBP3.87□□□□□ -1.79
UPF3B-203ENST00000478840 RSPH14Q9UHP6 348 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 SYNRGQ9UMZ2 1314 aa3.87□□□□□ -1.79
UPF3B-203ENST00000478840 IGKV1D-8A0A087WSZ0 117 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 IGHV1OR21-1A0A087WYE8 117 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 TRBV11-1A0A0K0K1C0 115 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 CDH16O75309 829 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 OR7A10O76100 309 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 C1orf105O95561 183 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 LGI1O95970 557 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 GATA1P15976 413 aaPredicted RBP3.86□□□□□ -1.79
UPF3B-203ENST00000478840 CHMLP26374 656 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 HNRNPH3P31942 346 aaKnown RBP3.86□□□□□ -1.79
UPF3B-203ENST00000478840 UGT1A3P35503 534 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 FDFT1P37268 417 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 PEX19P40855 299 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 MEOX2P50222 304 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 RPS15P62841 145 aaKnown RBP3.86□□□□□ -1.79
UPF3B-203ENST00000478840 KCNJ2P63252 427 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 C15orf32Q32M92 178 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 PARP15Q460N3 678 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 PRR30Q53SZ7 412 aaPredicted RBP3.86□□□□□ -1.79
UPF3B-203ENST00000478840 PAGE2BQ5JRK9 111 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 UTF1Q5T230 341 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 HSDL2Q6YN16 418 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 LRRC74BQ6ZQY2 392 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 VRK2Q86Y07 508 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 ERI1Q8IV48 349 aaKnown RBP3.86□□□□□ -1.79
UPF3B-203ENST00000478840 MFSD6LQ8IWD5 586 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 OR4K14Q8NGD5 310 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 CHCHD10Q8WYQ3 142 aaPredicted RBP3.86□□□□□ -1.79
UPF3B-203ENST00000478840 SLC38A4Q969I6 547 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 PGLYRP4Q96LB8 373 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 SELENOIQ9C0D9 397 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 Q9H3A6 140 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 ZNF702PQ9H963 129 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 PSME2Q9UL46 239 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 KIAA1257Q9ULG3 409 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 STAP1Q9ULZ2 295 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 KCNIP3Q9Y2W7 256 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 HCFC1P51610 2035 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 TTC41PQ6P2S7 1318 aa3.86□□□□□ -1.79
UPF3B-203ENST00000478840 A0A0G2JRQ6 117 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 GOLGA6L7A0A1B0GV03 622 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 K7N7A8 449 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 L7N2F9 121 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 WRBO00258 174 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 FTH1P02794 183 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 FGF1P05230 155 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 GZMAP12544 262 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 AQP1P29972 269 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 PRDX3P30048 256 aaKnown RBP3.85□□□□□ -1.79
UPF3B-203ENST00000478840 RDXP35241 583 aaKnown RBP3.85□□□□□ -1.79
UPF3B-203ENST00000478840 KIR2DS4P43632 304 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 TLE4Q04727 773 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 EGFEM1PQ0D2K5 195 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 IL18Q14116 193 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 ATAD3CQ5T2N8 411 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 UNQ9370/PRO34162Q6UXP9 181 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 BAIAP2L2Q6UXY1 529 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 ARCQ7LC44 396 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 SCD5Q86SK9 330 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 APOBEC3FQ8IUX4 373 aaKnown RBP3.85□□□□□ -1.79
UPF3B-203ENST00000478840 FTMTQ8N4E7 242 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 GPR151Q8TDV0 419 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 ZNF184Q99676 751 aaPredicted RBP3.85□□□□□ -1.79
UPF3B-203ENST00000478840 C11orf70Q9BRQ4 267 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 RIOK1Q9BRS2 568 aaKnown RBP3.85□□□□□ -1.79
UPF3B-203ENST00000478840 MFFQ9GZY8 342 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 AUNIPQ9H7T9 357 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 ANKRA2Q9H9E1 313 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 ZNF160Q9HCG1 818 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 NINLQ9Y2I6 1382 aa3.85□□□□□ -1.79
UPF3B-203ENST00000478840 HIP1O00291 1037 aa3.84□□□□□ -1.79
UPF3B-203ENST00000478840 BCL2L11O43521 198 aa3.84□□□□□ -1.79
UPF3B-203ENST00000478840 DFNA5O60443 496 aa3.84□□□□□ -1.79
UPF3B-203ENST00000478840 TBL1XO60907 577 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms