RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 PPP4R4Q6NUP7 873 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 MBOAT2Q6ZWT7 520 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 OR4K5Q8NGD3 323 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 OR6S1Q8NH40 331 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 MFSD8Q8NHS3 518 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 ROBO4Q8WZ75 1007 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 SLC25A36Q96CQ1 311 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 ALPK1Q96QP1 1244 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 DMRTA2Q96SC8 542 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 TAPBPLQ9BX59 468 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 REEP1Q9H902 201 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 TIGARQ9NQ88 270 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 PAQR5Q9NXK6 330 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 DNAJB9Q9UBS3 223 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 MCTS1Q9ULC4 181 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 SAMHD1Q9Y3Z3 626 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 U3KQV3 271 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 TENM4Q6N022 2769 aa12.12□□□□□ -0.47
NUDCD3-207ENST00000478769 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 CD8B2A6NJW9 211 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 M0R082 166 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 CLOCKO15516 846 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 DNPH1O43598 174 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 RAMP1O60894 148 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 KRT36O76013 467 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 AKR7A3O95154 331 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 SYNGR4O95473 234 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 CH25HO95992 272 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 IGF2P01344 180 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 IFI30P13284 250 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 MAKP20794 623 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 GRPRP30550 384 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 GPR4P46093 362 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 P2RY4P51582 365 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 AGFG1P52594 562 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 HMGA2P52926 109 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 CASP6P55212 293 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 CTBP2P56545 445 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 SLC35A1P78382 337 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 H3F3AP84243 136 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 ABLIM2Q6H8Q1 611 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 HMBOX1Q6NT76 420 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 ZFP1Q6P2D0 407 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 B3GNT6Q6ZMB0 384 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 TMEM179BQ7Z7N9 219 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 C10orf53Q8N6V4 93 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 RNF128Q8TEB7 428 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 LRTOMTQ8WZ04 291 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 BPIFA2Q96DR5 249 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 SGTBQ96EQ0 304 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 ZNF587Q96SQ5 575 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 TTYH2Q9BSA4 534 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 CALHM2Q9HA72 323 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 NTN4Q9HB63 628 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
NUDCD3-207ENST00000478769 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 AQP7P3A6NL99 342 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 E9PLN8 166 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 OR2T1O43869 369 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 DEAF1O75398 565 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 OR7A10O76100 309 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 TOXO94900 526 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 MT-ATP6P00846 226 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 LDLRP01130 860 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 HOXD4P09016 255 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 GLI4P10075 376 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 FCGR2AP12318 317 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 FUT1P19526 365 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 FASP25445 335 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 OMPP47874 163 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 NUP107P57740 925 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 PRKCDQ05655 676 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 SF3B4Q15427 424 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 FCRLAQ7L513 359 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 FJX1Q86VR8 437 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 RNF113BQ8IZP6 322 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 LRRC17Q8N6Y2 441 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 TMEM99Q8N816 258 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 OR9Q2Q8NGE9 314 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 PIGXQ8TBF5 258 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 WNT2BQ93097 391 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 ZHX1-C8orf76Q96EF9 292 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 FAM46AQ96IP4 442 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 VKORC1Q9BQB6 163 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 FKRPQ9H9S5 495 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 S100A14Q9HCY8 104 aa12.1□□□□□ -0.47
NUDCD3-207ENST00000478769 TMCC3Q9ULS5 477 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms