RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 VCANP13611 3396 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 A8MU10 97 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 SRRM5B3KS81 715 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC16A4O15374 487 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 DUX1O43812 170 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 LCMT2O60294 686 aaKnown RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 TBX19O60806 448 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 IGFBP1P08833 259 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 FAM200BP0CF97 657 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 CT45A10P0DMU9 189 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 CXCL8P10145 99 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 ANXA3P12429 323 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 SDC1P18827 310 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 CA8P35219 290 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 SNRPFP62306 86 aaKnown RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 SIGLEC14Q08ET2 396 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 CCDC173Q0VFZ6 552 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 COX10Q12887 443 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 PLD1Q13393 1074 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 STK38Q15208 465 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 NADK2Q4G0N4 442 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 TPGS2Q68CL5 300 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC8B1Q6J4K2 584 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 HSD11B1LQ7Z5J1 315 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 PARGQ86W56 976 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 CDR2LQ86X02 465 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZDHHC21Q8IVQ6 265 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 C11orf53Q8IXP5 236 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 CCDC65Q8IXS2 484 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 UBALD2Q8IYN6 164 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 DENND6BQ8NEG7 585 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 IPMKQ8NFU5 416 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 RFESDQ8TAC1 157 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 NANPQ8TBE9 248 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 ANP32BQ92688 251 aaKnown RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 DNAJC19Q96DA6 116 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZBED6CLQ96FA7 236 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 DHTKD1Q96HY7 919 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 VPS39Q96JC1 886 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 AKR1E2Q96JD6 320 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 RAB33BQ9H082 229 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 ASB7Q9H672 318 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 MEPEQ9NQ76 525 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 EHFQ9NZC4 300 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 CFAP45Q9UL16 551 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 DUSP12Q9UNI6 340 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 GMPPBQ9Y5P6 360 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 A0A0C4DFX4 3053 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 F5P12259 2224 aa3.09□□□□□ -1.91
CDC42BPA-212ENST00000478573 TMEM131Q92545 1883 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 A0A087WWV3 80 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 SMIM28A0A1B0GU29 152 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 GSAPA4D1B5 854 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF840PA6NDX5 716 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM220BPB1ANY3 271 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 PPIAL4DF5H284 164 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLC17A2O00624 439 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 LRRTM2O43300 516 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 STX11O75558 287 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 B3GAT3O94766 335 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 PRAMEF12O95522 483 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 MBD3O95983 291 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 HPP00738 406 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 H2AFZP0C0S5 128 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 XRCC1P18887 633 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 BCL3P20749 454 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 HNRNPA2B1P22626 353 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 DLSTP36957 453 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 PTGER3P43115 390 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 MAGEA9P43362 315 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ALDH3B2P48448 385 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ARHGDIBP52566 201 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 NUCB2P80303 420 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 PLOD1Q02809 727 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 CSTF1Q05048 431 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ENPEPQ07075 957 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZFP36L1Q07352 338 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 SMARCB1Q12824 385 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 SNTB2Q13425 540 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 CRMP1Q14194 572 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZBTB6Q15916 424 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 CAMK4Q16566 473 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 TATDN3Q17R31 274 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 KLHL40Q2TBA0 621 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 HIGD2BQ4VC39 106 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 PPM1LQ5SGD2 360 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLX4IPQ5VYV7 408 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 RESP18Q5W5W9 173 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 CES3Q6UWW8 571 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 CD300LGQ6UXG3 332 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF720Q7Z2F6 126 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 HIPK1Q86Z02 1210 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 C12orf56Q8IXR9 622 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 LRRC52Q8N7C0 313 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF671Q8TAW3 534 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 C2orf15Q8WU43 125 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 TFB1MQ8WVM0 346 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 OSTF1Q92882 214 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms