RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 STMN2Q93045 179 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 CPNE4Q96A23 557 aaPredicted RBP13.73□□□□□ -0.21
SEC13-215ENST00000477547 ZHX1-C8orf76Q96EF9 292 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 KLHL4Q9C0H6 718 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 TIGARQ9NQ88 270 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 ARMC1Q9NVT9 282 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 VNN3Q9NY84 501 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 CLCF1Q9UBD9 225 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 LYVE1Q9Y5Y7 322 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 INTS1Q8N201 2190 aaKnown RBP13.73□□□□□ -0.21
SEC13-215ENST00000477547 LRBAP50851 2863 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 MYO7BQ6PIF6 2116 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 A0A087WUU8 490 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 LIPT2A6NK58 231 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 SLC22A20A6NK97 555 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 AHRRA9YTQ3 701 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 TNFRSF11BO00300 401 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 GNGT2O14610 69 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 DEAF1O75398 565 aaPredicted RBP13.72□□□□□ -0.21
SEC13-215ENST00000477547 FCGR1AP12314 374 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 FCGR2AP12318 317 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 CARD18P57730 90 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 SLC35A1P78382 337 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 PON3Q15166 354 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 ZFP1Q6P2D0 407 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 PODNL1Q6PEZ8 512 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 PLXDC2Q6UX71 529 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 RPTNQ6XPR3 784 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 NRMQ8IXM6 262 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 OR4K5Q8NGD3 323 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 OSTF1Q92882 214 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 SLC25A36Q96CQ1 311 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 ALPK1Q96QP1 1244 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 MEPEQ9NQ76 525 aaPredicted RBP13.72□□□□□ -0.21
SEC13-215ENST00000477547 C6orf203Q9P0P8 240 aaPredicted RBP13.72□□□□□ -0.21
SEC13-215ENST00000477547 MCTS1Q9ULC4 181 aaKnown RBP13.72□□□□□ -0.21
SEC13-215ENST00000477547 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 ZNF175Q9Y473 711 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 FAM215AQ9Y5M1 114 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 U3KQV3 271 aa13.72□□□□□ -0.21
SEC13-215ENST00000477547 NCOA6Q14686 2063 aaPredicted RBP13.72□□□□□ -0.21
SEC13-215ENST00000477547 IGHV3-15A0A0B4J1V0 119 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 KDM4EB2RXH2 506 aaPredicted RBP13.71□□□□□ -0.21
SEC13-215ENST00000477547 FTCDNL1E5RQL4 147 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 LRRN3E7EW58 273 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 HNRNPRO43390 633 aaKnown RBP13.71□□□□□ -0.21
SEC13-215ENST00000477547 DNPH1O43598 174 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 OR2T1O43869 369 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 E2F6O75461 281 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 KRT36O76013 467 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 BGLAPP02818 100 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 STSP08842 583 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 IFI30P13284 250 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 KLK2P20151 261 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 FPR1P21462 350 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 CBLP22681 906 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 RAC3P60763 192 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 LSM11P83369 360 aaKnown RBP eCLIP13.71□□□□□ -0.21
SEC13-215ENST00000477547 SEC23BQ15437 767 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 B3GNT6Q6ZMB0 384 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 MBOAT2Q6ZWT7 520 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 RRM2BQ7LG56 351 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 P4HA3Q7Z4N8 544 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 ADGRE4PQ86SQ3 457 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 C10orf67Q8IYJ2 551 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 RPRMLQ8N4K4 120 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 OR4C15Q8NGM1 316 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 MFSD8Q8NHS3 518 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 FNDC9Q8TBE3 224 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 PIGXQ8TBF5 258 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 TAAR8Q969N4 342 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 MOGAT1Q96PD6 335 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 FUZQ9BT04 418 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 PRRG4Q9BZD6 226 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 KRCC1Q9NPI7 259 aaPredicted RBP13.71□□□□□ -0.21
SEC13-215ENST00000477547 C20orf141Q9NUB4 165 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 TRAPPC4Q9Y296 219 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 DOPEY1Q5JWR5 2465 aa13.71□□□□□ -0.21
SEC13-215ENST00000477547 DIDO1Q9BTC0 2240 aaKnown RBP13.71□□□□□ -0.22
SEC13-215ENST00000477547 ABCA12Q86UK0 2595 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 SH3PXD2BA1X283 911 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 CD8B2A6NJW9 211 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 H3BNX3 289 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 SMAD9O15198 467 aaKnown RBP13.7□□□□□ -0.22
SEC13-215ENST00000477547 CH25HO95992 272 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 MT-ATP6P00846 226 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 LDLRP01130 860 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 HOXD4P09016 255 aaPredicted RBP13.7□□□□□ -0.22
SEC13-215ENST00000477547 ENPP1P22413 925 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 FASP25445 335 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 GPR4P46093 362 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 LIMS1P48059 325 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 PPP1R8Q12972 351 aaKnown RBP13.7□□□□□ -0.22
SEC13-215ENST00000477547 LAPTM4AQ15012 233 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 ATP6AP1Q15904 470 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 ZNF74Q16587 644 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 NSUN5P2Q63ZY6 315 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 ABLIM2Q6H8Q1 611 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms