RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 C20orf85Q9H1P6 137 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 LRRN3Q9H3W5 708 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 HOXC10Q9NYD6 342 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 RPL36Q9Y3U8 105 aaKnown RBP2.13□□□□□ -2.07
TARDBP-208ENST00000477447 NSG1A0A0A6YYJ2 146 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 FAM166BA8MTA8 275 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 NDC80O14777 642 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 AGPAT2O15120 278 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 ARPC3O15145 178 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 RTL8CO15255 209 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 MED7O43513 233 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 GMFGO60234 142 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 IGKV3-11P04433 115 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 KLK3P07288 261 aaPredicted RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 RPL13AP40429 203 aaKnown RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 KIR2DS4P43632 304 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 CASP4P49662 377 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 GPM6AP51674 278 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 EFNB2P52799 333 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 LRRC63Q05C16 580 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 MICBQ29980 383 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 BOLA3Q53S33 107 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 MFSD6LQ8IWD5 586 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 TMEM61Q8N0U2 210 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 OR51G1Q8NGK1 321 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 SRSF12Q8WXF0 261 aaKnown RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 RLN3Q8WXF3 142 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 EFHD2Q96C19 240 aaPredicted RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 CMTM7Q96FZ5 175 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 TSGA13Q96PP4 275 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 MRPL45Q9BRJ2 306 aaKnown RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 ERP44Q9BS26 406 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 RAB34Q9BZG1 259 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 ACTR6Q9GZN1 396 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 REEP4Q9H6H4 257 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 RNF167Q9H6Y7 350 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 MYOZ2Q9NPC6 264 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 C6orf203Q9P0P8 240 aaPredicted RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 SEC14L3Q9UDX4 400 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 NUFIP1Q9UHK0 495 aaKnown RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF223Q9UK11 482 aaPredicted RBP2.12□□□□□ -2.07
TARDBP-208ENST00000477447 KLK12Q9UKR0 248 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 POLDIP2Q9Y2S7 368 aa2.12□□□□□ -2.07
TARDBP-208ENST00000477447 KDRP35968 1356 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 IGLV3-16A0A075B6K0 115 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 A0A0G2JLM5 398 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 IQANK1A0A1B0GTG1 560 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 RBMY1BA6NDE4 496 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 RBMY1EA6NEQ0 496 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 A8MXQ7 604 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 LOC110117498-PIK3R3F6TDL0 507 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 KRTAP4-16G5E9R7 235 aaPredicted RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 OXSR1O95747 527 aaPredicted RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 PRB2P02812 416 aaPredicted RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 RBMY1DP0C7P1 496 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 RBMY1A1P0DJD3 496 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 POU2F1P14859 743 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 PCMT1P22061 227 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 FMO3P31513 532 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 GLP1RP43220 463 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 QARSP47897 775 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 CSNK1DP48730 415 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 DLX1P56177 255 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 ATP6AP1Q15904 470 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 CARD16Q5EG05 197 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 DMRTC1Q5HYR2 192 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 ATAD3BQ5T9A4 648 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 CTRB2Q6GPI1 263 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF620Q6ZNG0 422 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 COX15Q7KZN9 410 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 OR2T3Q8NH03 318 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 TMEM158Q8WZ71 300 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 NDRG1Q92597 394 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 TIMD4Q96H15 378 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 CLCC1Q96S66 551 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 OR11A1Q9GZK7 315 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 NHEJ1Q9H9Q4 299 aaPredicted RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 SIAEQ9HAT2 523 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 EML4Q9HC35 981 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 SMOXQ9NWM0 555 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 THUMPD1Q9NXG2 353 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 TMCO1Q9UM00 188 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 TP53TG5Q9Y2B4 290 aa2.11□□□□□ -2.07
TARDBP-208ENST00000477447 MRPS7Q9Y2R9 242 aaKnown RBP2.11□□□□□ -2.07
TARDBP-208ENST00000477447 TCRBV9S1A1TA0A576 114 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 H0YCG3 227 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 MAGEB3O15480 346 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 DFNA5O60443 496 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 SCGNO76038 276 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 PCCAP05165 728 aaPredicted RBP2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ABOP16442 354 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 CRISP2P16562 243 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 GNA11P29992 359 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 IFNAR2P48551 515 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 GSSP48637 474 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ARRB1P49407 418 aaPredicted RBP2.1□□□□□ -2.07
TARDBP-208ENST00000477447 PPOXP50336 477 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 TNFRSF17Q02223 184 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 KLRB1Q12918 225 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 PLD1Q13393 1074 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms