RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 GIPC3Q8TF64 312 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 PTPMT1Q8WUK0 201 aaPredicted RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 OSTF1Q92882 214 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 EMG1Q92979 244 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 HGDQ93099 445 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 SLC38A4Q969I6 547 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 ULK4Q96C45 1275 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 DCPSQ96C86 337 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 CCDC124Q96CT7 223 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 DGCR14Q96DF8 476 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 PABPC5Q96DU9 382 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 C14orf144Q96I85 54 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 SERPINB11Q96P15 392 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 SLC38A2Q96QD8 506 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 OR5B2Q96R09 309 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 OR5M11Q96RB7 305 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 KRT12Q99456 494 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 PAFAH2Q99487 392 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 SEPT5Q99719 369 aaPredicted RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 HOPXQ9BPY8 73 aaPredicted RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 KLHDC3Q9BQ90 382 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 ZNF559Q9BR84 538 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 UTP23Q9BRU9 249 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 NICN1Q9BSH3 213 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 TMEM43Q9BTV4 400 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 CHRDL1Q9BU40 450 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 TRAF4Q9BUZ4 470 aaPredicted RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 ALG12Q9BV10 488 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 FICDQ9BVA6 458 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 TMEM109Q9BVC6 243 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 FGFBP2Q9BYJ0 223 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 TM6SF2Q9BZW4 377 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 STRADBQ9C0K7 418 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 NAT10Q9H0A0 1025 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 TRABDQ9H4I3 376 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 LYRM4Q9HD34 91 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 PPANQ9NQ55 473 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 ZNF71Q9NQZ8 489 aaPredicted RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 FBXO8Q9NRD0 319 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 C20orf141Q9NUB4 165 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 DDX19AQ9NUU7 478 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 MRPL22Q9NWU5 206 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 SDHAF2Q9NX18 166 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 MTMR10Q9NXD2 777 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 TREM2Q9NZC2 230 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 LRWD1Q9UFC0 647 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 UBQLN2Q9UHD9 624 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 MRM2Q9UI43 246 aaKnown RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 ZNF639Q9UID6 485 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 FBXL3Q9UKT7 428 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 IKZF3Q9UKT9 509 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 CLEC4EQ9ULY5 219 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 NPTNQ9Y639 398 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 URGCP-MRPS24S4R325 110 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 TRIOBPQ9H2D6 2365 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 ARHGEF10O15013 1369 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 PCM1Q15154 2024 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 POLA1P09884 1462 aaPredicted RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 FYCO1Q9BQS8 1478 aa2.18□□□□□ -2.06
XRN1-211ENST00000477237 INO80Q9ULG1 1556 aaPredicted RBP2.18□□□□□ -2.06
XRN1-211ENST00000477237 SF3B1O75533 1304 aaKnown RBP eCLIP2.17□□□□□ -2.06
XRN1-211ENST00000477237 ZFYVE9O95405 1425 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SPATA31E1Q6ZUB1 1445 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 UACAQ9BZF9 1416 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ATRXP46100 2492 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TMEM131LA2VDJ0 1609 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SETD1AO15047 1707 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 LOC100509620A0A075B734 347 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TRAV26-1A0A087WT03 109 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 IGKV6D-21A0A0A0MT36 114 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 A0A1W2PNV4 684 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 A0A1W2PRG6 482 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 FAM92AA1XBS5 289 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TMEM213A2RRL7 107 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MBLAC1A4D2B0 266 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 METTL21EPA6NDL7 271 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TUBAL3A6NHL2 446 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PP2D1A8MPX8 630 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ANKRD66B4E2M5 251 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 H3BN98 237 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TEX46H3BTG2 121 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 K7EP13 123 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 M0QYV0 167 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 DLGAP1O14490 977 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PRMT5O14744 637 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 CFLARO15519 480 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 FLRT2O43155 660 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 DLEU1O43261 78 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SGCEO43556 437 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SNAI2O43623 268 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 UGT1A9O60656 530 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RAMP3O60896 148 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ADAP1O75689 374 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 DCTN3O75935 186 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ZFAND5O76080 213 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 OR2F2O95006 317 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TXNDC12O95881 172 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MT-ND1P03886 318 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RLN1P04808 185 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ICAM1P05362 532 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms