RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 COQ8BQ96D53 544 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 APOPT1Q96IL0 206 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 SLC35G5Q96KT7 338 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 OR7D2Q96RA2 312 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 KCNS3Q9BQ31 491 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 THUMPD3Q9BV44 507 aaKnown RBP6.4□□□□□ -1.38
BRCA1-214ENST00000477152 DUSP26Q9BV47 211 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 GATA5Q9BWX5 397 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-214ENST00000477152 BEX2Q9BXY8 128 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 SRXN1Q9BYN0 137 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 TRIM2Q9C040 744 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 CACYBPQ9HB71 228 aaKnown RBP6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ACER3Q9NUN7 267 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ASB6Q9NWX5 421 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 TMEM160Q9NX00 188 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 TAS2R16Q9NYV7 291 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 AMDHD2Q9Y303 409 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 FKBP7Q9Y680 259 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 NSD1Q96L73 2696 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-214ENST00000477152 DPRXA6NFQ7 191 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 SMIM23A6NLE4 172 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 PIP5K1BO14986 540 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 SSX4O60224 188 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 PEX11AO75192 247 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 LYZL6O75951 148 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 PGM3O95394 542 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 PMS2P2O95744 297 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 C6orf47O95873 294 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 ERCC1P07992 297 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-214ENST00000477152 SOD3P08294 240 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 FAM157CP0CG43 387 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 TTKP33981 857 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 DIO1P49895 249 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 IFFO1Q0D2I5 559 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 LRRC74AQ0VAA2 488 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 GPR68Q15743 365 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF141Q15928 474 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 ARHGAP11BQ3KRB8 267 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 SYT14P1Q58G82 188 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 CYB5R2Q6BCY4 276 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 C17orf78Q8N4C9 275 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 TRIML2Q8N7C3 387 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 OR7A2PQ8NGA2 310 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 PROX1Q92786 737 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 TUBGCP3Q96CW5 907 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 DDIT4LQ96D03 193 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 SDF2Q99470 211 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 RHOXF2Q9BQY4 288 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 MYOZ1Q9NP98 299 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-214ENST00000477152 SIRT3Q9NTG7 399 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-214ENST00000477152 TRAPPC4Q9Y296 219 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 SLC9A8Q9Y2E8 581 aa6.4□□□□□ -1.39
BRCA1-214ENST00000477152 IGKV3D-15A0A087WSY6 115 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 GOLGA8QA0A0J9YX86 632 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 GOLGA8OA6NCC3 632 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF814B7Z6K7 855 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 GOLGA8NF8WBI6 632 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 ETV2O00321 342 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-214ENST00000477152 NTN1O95631 604 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 IGHV4-39P01824 125 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
BRCA1-214ENST00000477152 NUDT17P0C025 328 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 LAMP1P11279 417 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 COX5AP20674 150 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 APEX1P27695 318 aaKnown RBP6.39□□□□□ -1.39
BRCA1-214ENST00000477152 GZMKP49863 264 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 KHKP50053 298 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 SLC35A1P78382 337 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 LOXL1Q08397 574 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-214ENST00000477152 TSC22D1Q15714 1073 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 PGS1Q32NB8 556 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 PDZK1Q5T2W1 519 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 IL23RQ5VWK5 629 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 CBLN3Q6UW01 205 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 UGT2A3Q6UWM9 527 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 GRINAQ7Z429 371 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 C6orf120Q7Z4R8 191 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 BCL6BQ8N143 479 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-214ENST00000477152 MUC15Q8N387 334 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 Q8N3U1 123 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 ARFGAP2Q8N6H7 521 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF540Q8NDQ6 660 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 OR2T11Q8NH01 316 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 LILRB1Q8NHL6 650 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-214ENST00000477152 SOX7Q9BT81 388 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 TXLNGYQ9BZA5 131 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 SHARPINQ9H0F6 387 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 CXorf36Q9H7Y0 433 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 COQ10BQ9H8M1 238 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 OBP2BQ9NPH6 170 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 CHRNA9Q9UGM1 479 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 WDR45Q9Y484 360 aa6.39□□□□□ -1.39
BRCA1-214ENST00000477152 IGHV3-15A0A0B4J1V0 119 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 RNF103-CHMP3A0A140T963 221 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 OR6C65A6NJZ3 312 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 NDUFS8O00217 210 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 RNASET2O00584 256 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 SMAD9O15198 467 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 KRT33AO76009 404 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms