RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GALNT7Q86SF2 657 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 NRROSQ86YC3 692 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SLC38A6Q8IZM9 456 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ZFP82Q8N141 532 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 CBARPQ8N350 705 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OR2L2Q8NH16 312 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SETD6Q8TBK2 473 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 METTL21AQ8WXB1 218 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 TBL1XR1Q9BZK7 514 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SRRQ9GZT4 340 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ANKRD10Q9NXR5 420 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 COMMD9Q9P000 198 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 LRIT1Q9P2V4 623 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SIRT4Q9Y6E7 314 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SESN1Q9Y6P5 492 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 AP1M2Q9Y6Q5 423 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 TCRBV16S1A1N1A0A5B0 115 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 C1orf226A1L170 272 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 LRIT2A6NDA9 550 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 H0YGG7 62 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MRPS14O60783 128 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 RGS9O75916 674 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR7A10O76100 309 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF28P17035 718 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 FCARP24071 287 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 CRYBB2P43320 205 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PITPNBP48739 271 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 CSRP3P50461 194 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 EPHA5P54756 1037 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MCCD1P59942 119 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ARF3P61204 181 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PPP3R1P63098 170 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ZP2Q05996 745 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GPR18Q14330 331 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NDUFA5Q16718 116 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM196Q5HYL7 178 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 C9orf135Q5VTT2 229 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 DHRS4L2Q6PKH6 230 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NATD1Q8N6N6 113 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NANOGP1Q8N7R0 232 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR56B4Q8NH76 319 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM41AQ96HV5 264 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PRRC1Q96M27 445 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 DOK1Q99704 481 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 CTRCQ99895 268 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 WDR77Q9BQA1 342 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 C1QTNF3Q9BXJ4 246 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TRPV4Q9HBA0 871 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ACKR4Q9NPB9 350 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MAN2C1Q9NTJ4 1040 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NPAP1Q9NZP6 1156 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF639Q9UID6 485 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NUP50Q9UKX7 468 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 A4GNTQ9UNA3 340 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TRBV5-3A0A0A0MS03 114 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 HYKKA2RU49 373 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PRAMEF27A3QJZ7 478 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SOBPA7XYQ1 873 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 KNG1P01042 644 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 IFNA6P05013 189 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 HMGN1P05114 100 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SFTPBP07988 381 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ADRB1P08588 477 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ANKRD34CP0C6C1 535 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ACP2P11117 423 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 HIST1H1CP16403 213 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 JUNDP17535 347 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 BSGP35613 385 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GDNFP39905 211 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 LSSP48449 732 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MLLT11Q13015 90 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GRM7Q14831 915 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF836Q6ZNA1 936 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 DPPA4Q7L190 304 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SSX6Q7RTT6 188 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR2L3Q8NG85 312 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR56A1Q8NGH5 318 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MOSPD2Q8NHP6 518 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ELP4Q96EB1 424 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TXNDC15Q96J42 360 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ST6GAL2Q96JF0 529 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 HS6ST2Q96MM7 605 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 DGAT2Q96PD7 388 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR2M4Q96R27 311 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ABHD1Q96SE0 405 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 C7orf50Q9BRJ6 194 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR11A1Q9GZK7 315 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SLC6A15Q9H2J7 730 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MIXL1Q9H2W2 232 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 FBXO8Q9NRD0 319 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 BABAM2Q9NXR7 383 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GRHPRQ9UBQ7 328 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 FBXO4Q9UKT5 387 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ANKRD36A6QL64 1941 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 C4orf51C9J302 202 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GREM1O60565 184 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 AMY2AP04746 511 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 EDN3P14138 238 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GSTM3P21266 225 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 CXCR1P25024 350 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms