RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 UBE2J2Q8N2K1 259 aa18.68■□□□□ 0.58
LIME1-204ENST00000476183 ZNF433Q8N7K0 673 aaPredicted RBP18.68■□□□□ 0.58
LIME1-204ENST00000476183 ZIC4Q8N9L1 334 aa18.68■□□□□ 0.58
LIME1-204ENST00000476183 OR52E4Q8NGH9 312 aa18.68■□□□□ 0.58
LIME1-204ENST00000476183 HSD17B8Q92506 261 aa18.68■□□□□ 0.58
LIME1-204ENST00000476183 TAPBPLQ9BX59 468 aa18.68■□□□□ 0.58
LIME1-204ENST00000476183 RPS6KB2Q9UBS0 482 aa18.68■□□□□ 0.58
LIME1-204ENST00000476183 ARID1AO14497 2285 aa18.68■□□□□ 0.58
LIME1-204ENST00000476183 DSCAMO60469 2012 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 IGKV1D-42A0A075B6H8 117 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 ELOA3DA6NLF2 546 aaPredicted RBP18.67■□□□□ 0.58
LIME1-204ENST00000476183 M0QX08 132 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 PCGF2P35227 344 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 RGS8P57771 180 aaPredicted RBP18.67■□□□□ 0.58
LIME1-204ENST00000476183 ACKR1Q16570 336 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 DUSP7Q16829 419 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 ELOA3BQ3SY89 546 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 RABL3Q5HYI8 236 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 COQ5Q5HYK3 327 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 CASP12Q6UXS9 341 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 SNX32Q86XE0 403 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 BHLHE22Q8NFJ8 381 aaPredicted RBP18.67■□□□□ 0.58
LIME1-204ENST00000476183 ELOA3Q8NG57 546 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 GPR32P1Q8NGA4 272 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 OR9K2Q8NGE7 335 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 LRRC58Q96CX6 371 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 KTI12Q96EK9 354 aaPredicted RBP18.67■□□□□ 0.58
LIME1-204ENST00000476183 ZNF385AQ96PM9 386 aaKnown RBP18.67■□□□□ 0.58
LIME1-204ENST00000476183 TMEM204Q9BSN7 226 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 TRIM2Q9C040 744 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 PIF1Q9H611 641 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 C12orf10Q9HB07 376 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 TESQ9UGI8 421 aaKnown RBP18.67■□□□□ 0.58
LIME1-204ENST00000476183 SLC9A8Q9Y2E8 581 aa18.67■□□□□ 0.58
LIME1-204ENST00000476183 FLNAP21333 2647 aaKnown RBP18.66■□□□□ 0.58
LIME1-204ENST00000476183 LOC100653049A0A140TA62 436 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 MRASO14807 208 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 ATP8B1O43520 1251 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 KRT34O76011 436 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 AHSA1O95433 338 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 RPS5P46782 204 aaKnown RBP18.66■□□□□ 0.58
LIME1-204ENST00000476183 NR1H2P55055 460 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 CYLC2Q14093 348 aaPredicted RBP18.66■□□□□ 0.58
LIME1-204ENST00000476183 OR1Q1Q15612 314 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 STK11Q15831 433 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 ALG10BQ5I7T1 473 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 ZNF704Q6ZNC4 412 aaPredicted RBP18.66■□□□□ 0.58
LIME1-204ENST00000476183 GPAT4Q86UL3 456 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 MFSD8Q8NHS3 518 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 TMEM45BQ96B21 275 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 ARHGDIGQ99819 225 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 SF3B5Q9BWJ5 86 aaKnown RBP18.66■□□□□ 0.58
LIME1-204ENST00000476183 MRGBPQ9NV56 204 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 ARMCX1Q9P291 453 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 MALT1Q9UDY8 824 aa18.66■□□□□ 0.58
LIME1-204ENST00000476183 A0A0B4J2E0 115 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 A0A1B0GX12 115 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 M0R3H8 397 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 PDLIM1O00151 329 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 FZD7O75084 574 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 LGI1O95970 557 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 ITGA5P08648 1049 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 CRYBA2P53672 197 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 FAPQ12884 760 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 MMEL1Q495T6 779 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 TSPO2Q5TGU0 170 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 CALHM3Q86XJ0 350 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 P3H2Q8IVL5 708 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 DNAJA4Q8WW22 397 aaPredicted RBP18.65■□□□□ 0.58
LIME1-204ENST00000476183 TAAR8Q969N4 342 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 TAMM41Q96BW9 452 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 SLC25A36Q96CQ1 311 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 USB1Q9BQ65 265 aaKnown RBP18.65■□□□□ 0.58
LIME1-204ENST00000476183 SLC7A10Q9NS82 523 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 ASB6Q9NWX5 421 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 SEC14L4Q9UDX3 406 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 SLC13A4Q9UKG4 626 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 USP22Q9UPT9 525 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 CAPN7Q9Y6W3 813 aa18.65■□□□□ 0.58
LIME1-204ENST00000476183 BBIP1A8MTZ0 92 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 RAD51DO75771 328 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 PNMTP11086 282 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 GGT1P19440 569 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 CD247P20963 164 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 NCALDP61601 193 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 MAPRE2Q15555 327 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 NPTX1Q15818 432 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 NRF1Q16656 503 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 VMACQ2NL98 169 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 NCMAPQ5T1S8 102 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 FAM91A1Q658Y4 838 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 TMEM225Q6GV28 225 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 ULK3Q6PHR2 472 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 SLC30A8Q8IWU4 369 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 OR8J3Q8NGG0 315 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 OR4D11Q8NGI4 311 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 SLC38A4Q969I6 547 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 TMEM27Q9HBJ8 222 aa18.64■□□□□ 0.57
LIME1-204ENST00000476183 BEX4Q9NWD9 120 aaPredicted RBP18.64■□□□□ 0.57
LIME1-204ENST00000476183 PARPBPQ9NWS1 579 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms