RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 SYPL1Q16563 259 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 CARTPTQ16568 116 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 GSTA3Q16772 222 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 FAM174BQ3ZCQ3 159 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 IQCCQ4KMZ1 466 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 HIKESHIQ53FT3 197 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 FAM120AOSQ5T036 256 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 MRPL2Q5T653 305 aaKnown RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 TMEM225Q6GV28 225 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 GPAT4Q86UL3 456 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 RNF130Q86XS8 419 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 LRRC34Q8IZ02 419 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 TMEM99Q8N816 258 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 ANKFN1Q8N957 763 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 C3orf49Q96BT1 292 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 MSI2Q96DH6 328 aaKnown RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 AURKBQ96GD4 344 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 CCDC115Q96NT0 180 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF385AQ96PM9 386 aaKnown RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF317Q96PQ6 595 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 VRK1Q99986 396 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 PRR14Q9BWN1 585 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 TAPBPLQ9BX59 468 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 MTHFD2LQ9H903 347 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 MOV10Q9HCE1 1003 aaKnown RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 CA10Q9NS85 328 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 BTNL2Q9UIR0 455 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 FBXO9Q9UK97 447 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-205ENST00000475944 RAP2CQ9Y3L5 183 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 ALPK2Q86TB3 2170 aa9.45□□□□□ -0.9
CDRT1-205ENST00000475944 IGHV4-61A0A0C4DH41 118 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 CCDC154A6NI56 674 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 OR6C65A6NJZ3 312 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 LIPT2A6NK58 231 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF587BE7ETH6 402 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 VAMP5O95183 116 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 DBIP07108 87 aaKnown RBP9.44□□□□□ -0.9
CDRT1-205ENST00000475944 NR2F1P10589 423 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 CREB1P16220 341 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 LBPP18428 481 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 RPS4Y1P22090 263 aaKnown RBP9.44□□□□□ -0.9
CDRT1-205ENST00000475944 PPOXP50336 477 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 RPL14P50914 215 aaKnown RBP9.44□□□□□ -0.9
CDRT1-205ENST00000475944 ABCE1P61221 599 aaKnown RBP9.44□□□□□ -0.9
CDRT1-205ENST00000475944 LRRC74AQ0VAA2 488 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 CHI3L2Q15782 390 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 C3orf36Q3SXR2 165 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 TBRG1Q3YBR2 411 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 LIPNQ5VXI9 398 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 IL17RELQ6ZVW7 336 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 SPATA19Q7Z5L4 167 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 PEX5LQ8IYB4 626 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 ZIC4Q8N9L1 334 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 OR1K1Q8NGR3 316 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 PKNOX2Q96KN3 472 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 FOXN4Q96NZ1 517 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 PANX1Q96RD7 426 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 ADAM19Q9H013 955 aa9.44□□□□□ -0.9
CDRT1-205ENST00000475944 HEATR1Q9H583 2144 aaKnown RBP9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ARPC4-TTLL3A0A0A6YYG9 625 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 WDR91A4D1P6 747 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 BIRC5O15392 142 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 LGI1O95970 557 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 TGFAP01135 160 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ERCC1P07992 297 aaPredicted RBP9.43□□□□□ -0.9
CDRT1-205ENST00000475944 OR4A8P0C604 315 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF23P17027 643 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 COPZ1P61923 177 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 NAAAQ02083 359 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 EFNB3Q15768 340 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ADIPOQQ15848 244 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 LIN52Q52LA3 116 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 WBP2NLQ6ICG8 309 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF621Q6ZSS3 439 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 CADM2Q8N3J6 435 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ANKS4BQ8N8V4 417 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 OR4F15Q8NGB8 312 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 MAGEE2Q8TD90 523 aaPredicted RBP9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ALKBH3Q96Q83 286 aaPredicted RBP9.43□□□□□ -0.9
CDRT1-205ENST00000475944 NUF2Q9BZD4 464 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 BPESC1Q9GZL8 116 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 RAB1BQ9H0U4 201 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 ADPRHL2Q9NX46 363 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 CRNNQ9UBG3 495 aaPredicted RBP9.43□□□□□ -0.9
CDRT1-205ENST00000475944 RASD1Q9Y272 281 aa9.43□□□□□ -0.9
CDRT1-205ENST00000475944 A0A096LPI6 279 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 CDHR4A6H8M9 788 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 A8MVM7 634 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 VSTM5A8MXK1 200 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 FRS3O43559 492 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 KRT75O95678 551 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 C1QCP02747 245 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 PGRP06401 933 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 CECR9P0C854 216 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
CDRT1-205ENST00000475944 SLC1A6P48664 564 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 SELENOPP49908 381 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 IDH3GP51553 393 aaPredicted RBP9.42□□□□□ -0.9
CDRT1-205ENST00000475944 SH3BGRP55822 239 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms