RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PARPBPQ9NWS1 579 aa6.14□□□□□ -1.43
HDAC3-207ENST00000475549 SLAMF8Q9P0V8 285 aa6.14□□□□□ -1.43
HDAC3-207ENST00000475549 SEC14L4Q9UDX3 406 aa6.14□□□□□ -1.43
HDAC3-207ENST00000475549 PCDHB14Q9Y5E9 798 aa6.14□□□□□ -1.43
HDAC3-207ENST00000475549 SPIN1Q9Y657 262 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-207ENST00000475549 DSCAMO60469 2012 aa6.14□□□□□ -1.43
HDAC3-207ENST00000475549 FREM1Q5H8C1 2179 aa6.14□□□□□ -1.43
HDAC3-207ENST00000475549 CADP27708 2225 aa6.14□□□□□ -1.43
HDAC3-207ENST00000475549 TRPC5OSA6NMA1 111 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 TMEM229AB2RXF0 380 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 FTCDNL1E5RQL4 147 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 ATP6V1G2-DDX39BF2Z307 99 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 H7C417 338 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 NR5A2O00482 541 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 FRS3O43559 492 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF500O60304 480 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 UPK3AO75631 287 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 LGI1O95970 557 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 BCHEP06276 602 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 GPIP06744 558 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 ZCCHC18P0CG32 403 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 IDO1P14902 403 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 CDH2P19022 906 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 CXCR1P25024 350 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 MPGP29372 298 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 CRATP43155 626 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 SELENOPP49908 381 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 FABP6P51161 128 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 POLR2JP52435 117 aaKnown RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 MAGOHP61326 146 aaKnown RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 TXNL4AP83876 142 aaKnown RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 LRRC74AQ0VAA2 488 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 RGNQ15493 299 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 SWI5Q1ZZU3 235 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 HHATQ5VTY9 493 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 C1orf140Q5VVS0 124 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 WBP2NLQ6ICG8 309 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 SLC2A7Q6PXP3 512 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 KLHL17Q6TDP4 642 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 CASP12Q6UXS9 341 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 CREB3L2Q70SY1 520 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 CXXC5Q7LFL8 322 aaKnown RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 SSX8Q7RTT4 187 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 AAED1Q7RTV5 226 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 GPAT4Q86UL3 456 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 HIPK1Q86Z02 1210 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 FUNDC1Q8IVP5 155 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 WDFY1Q8IWB7 410 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 MSRB3Q8IXL7 192 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 PEX5LQ8IYB4 626 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 KIRREL3Q8IZU9 778 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 CADM2Q8N3J6 435 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 GLB1L3Q8NCI6 653 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 C1orf162Q8NEQ5 155 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 GTF2H4Q92759 462 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 BCL2L2Q92843 193 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 C3orf49Q96BT1 292 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 TLCD1Q96CP7 247 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF837Q96EG3 531 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 KTI12Q96EK9 354 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 TMEM19Q96HH6 336 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 HS6ST2Q96MM7 605 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 WFDC6Q9BQY6 131 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 NAA11Q9BSU3 229 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 PTDSS2Q9BVG9 487 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 SF3B5Q9BWJ5 86 aaKnown RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 PRR14Q9BWN1 585 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 PAIP1Q9H074 479 aaKnown RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 ALG2Q9H553 416 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 MANSC1Q9H8J5 431 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 YAE1D1Q9NRH1 226 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 FAIMQ9NVQ4 179 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 ADPRHL2Q9NX46 363 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 SLC25A37Q9NYZ2 338 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 B3GAT1Q9P2W7 334 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 UPB1Q9UBR1 384 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 DCTN4Q9UJW0 460 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 MGAT4BQ9UQ53 548 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 SLC9A8Q9Y2E8 581 aa6.13□□□□□ -1.43
HDAC3-207ENST00000475549 NUP214P35658 2090 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-207ENST00000475549 IGKV1D-42A0A075B6H8 117 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 A0A096LPE4 126 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 IGHV1-18A0A0C4DH31 117 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 A0A0G2JPF8 293 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 A0A1W2PPZ6 126 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF503-AS2A6NEH8 195 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ELOA3DA6NLF2 546 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-207ENST00000475549 A8MVM7 634 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 HNRNPCL2B2RXH8 293 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 HNRNPCL3B7ZW38 293 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 UBDO15205 165 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TLX2O43763 284 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TPST1O60507 370 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TPST2O60704 377 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 HNRNPCL1O60812 293 aaKnown RBP6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF432O94892 652 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 KRT75O95678 551 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 HNRNPCL4P0DMR1 293 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 HTR2AP28223 471 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 APOBEC3AP31941 199 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms