RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 GAREM1Q9H706 876 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 MYEF2Q9P2K5 600 aaKnown RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 IL20RAQ9UHF4 553 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 A0A1B0GUH1 482 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 IGHV2-70P01814 119 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 PTAFRP25105 342 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 MPIP34949 423 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 RAD52P43351 418 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 SSTP61278 116 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 PRR5P85299 388 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 Q3ZCU0 254 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 SLC22A10Q63ZE4 541 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 SFRP4Q6FHJ7 346 aaPredicted RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 ZC3H14Q6PJT7 736 aaKnown RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 SLC16A11Q8NCK7 471 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 OR7G2Q8NG99 324 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 TRMT10AQ8TBZ6 339 aaKnown RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 OR1E3Q8WZA6 343 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 TSACCQ96A04 125 aaPredicted RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 SGK3Q96BR1 496 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 SLC35A4Q96G79 324 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 NIT2Q9NQR4 276 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 NANSQ9NR45 359 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 TRIOO75962 3097 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 A0A0G2JK05 382 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 CENPVL1A0A0U1RR11 272 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 TMEM82A0PJX8 343 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 HMSDA8MTL9 139 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 PRAF2O60831 178 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SNAPC5O75971 98 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SHC1P29353 583 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 RORAP35398 523 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 MAT1AQ00266 395 aaKnown RBP11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ID2Q02363 134 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 TGM3Q08188 693 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ACSM1Q08AH1 577 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF791Q3KP31 576 aaPredicted RBP11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ENTPD8Q5MY95 495 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 METTL11BQ5VVY1 283 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ENPP7Q6UWV6 458 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 NKAIN4Q8IVV8 208 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 TMEFF1Q8IYR6 380 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ZFP82Q8N141 532 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 PIGKQ92643 395 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 TCEAL3Q969E4 200 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ARL5BQ96KC2 179 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ZFP3Q96NJ6 502 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ADAT1Q9BUB4 502 aaKnown RBP11.97□□□□□ -0.49
CCNL1-216ENST00000475298 OR10A4Q9H209 315 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
CCNL1-216ENST00000475298 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF780BQ9Y6R6 833 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 OR6C68A6NDL8 312 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SLC9B1P1A6NJY1 282 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 P2RX6O15547 441 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 PIP5K1CO60331 668 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 THY1P04216 161 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 CRYBA1P05813 215 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF806P0C7X5 589 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 CPN1P15169 458 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 CD96P40200 585 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 GPR4P46093 362 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 ANXA11P50995 505 aaKnown RBP11.97□□□□□ -0.49
CCNL1-216ENST00000475298 PSMA6P60900 246 aaKnown RBP11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SHC2P98077 582 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 TFF2Q03403 129 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 DYRK1AQ13627 763 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 GUCA2BQ16661 112 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 FAM27D1Q5T7N8 215 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SFXN4Q6P4A7 337 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 OR4F15Q8NGB8 312 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 OR10K1Q8NGX5 313 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 OR14A16Q8NHC5 309 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SPRYD4Q8WW59 207 aaPredicted RBP11.97□□□□□ -0.49
CCNL1-216ENST00000475298 DIO2Q92813 273 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 CDS1Q92903 461 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 OR2M4Q96R27 311 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SLC25A32Q9H2D1 315 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 OR51M1Q9H341 326 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 MIOXQ9UGB7 285 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 SLC13A4Q9UKG4 626 aa11.97□□□□□ -0.49
CCNL1-216ENST00000475298 PRUNE2Q8WUY3 3088 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 ARHGEF17Q96PE2 2063 aaPredicted RBP11.96□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF860A6NHJ4 632 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 AQP8O94778 261 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 UBL3O95164 117 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 SPDEFO95238 335 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 GNSP15586 552 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 GALP22466 123 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 PTGFRP43088 359 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 STXBP1P61764 594 aaKnown RBP11.96□□□□□ -0.49
CCNL1-216ENST00000475298 DCDP81605 110 aaKnown RBP11.96□□□□□ -0.49
CCNL1-216ENST00000475298 RBMS2Q15434 407 aaKnown RBP11.96□□□□□ -0.49
CCNL1-216ENST00000475298 NDUFA9Q16795 377 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 DEFB134Q4QY38 66 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 DHRS7BQ6IAN0 325 aaPredicted RBP11.96□□□□□ -0.49
CCNL1-216ENST00000475298 SMARCD3Q6STE5 483 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.49
CCNL1-216ENST00000475298 MTSS1LQ765P7 747 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms