RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MTORP42345 2549 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 ARFIP2P53365 341 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 FAPQ12884 760 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 PPA1Q15181 289 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 CYP51A1Q16850 503 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 TIMM23BQ5SRD1 257 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 LSMEM1Q8N8F7 131 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 OR9K2Q8NGE7 335 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 AKAP1Q92667 903 aaKnown RBP eCLIP15.81■□□□□ 0.12
UPF3A-203ENST00000474056 PIGTQ969N2 578 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 ZNF385AQ96PM9 386 aaKnown RBP15.81■□□□□ 0.12
UPF3A-203ENST00000474056 ZNF607Q96SK3 696 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 USB1Q9BQ65 265 aaKnown RBP15.81■□□□□ 0.12
UPF3A-203ENST00000474056 PTDSS2Q9BVG9 487 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 ASB6Q9NWX5 421 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 RNF115Q9Y4L5 304 aa15.81■□□□□ 0.12
UPF3A-203ENST00000474056 A0A1B0GWA3 101 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 CIB4A0PJX0 185 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 ELOA3DA6NLF2 546 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 CCT8L1PA6NM43 557 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 FTCDNL1E5RQL4 147 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 PDLIM1O00151 329 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 HS3ST1O14792 307 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 SMPD2O60906 423 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 MFN2O95140 757 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 AHSA1O95433 338 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 OPN1SWP03999 348 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 RPS5P46782 204 aaKnown RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 PCBP3P57721 371 aaKnown RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 NKX6-1P78426 367 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 GUCY1A3Q02108 690 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 ELOA3BQ3SY89 546 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 TSPO2Q5TGU0 170 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 C6orf89Q6UWU4 347 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 GPAT4Q86UL3 456 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 ARMC8Q8IUR7 673 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 ZIC4Q8N9L1 334 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 SMYD1Q8NB12 490 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 C11orf65Q8NCR3 313 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 ELOA3Q8NG57 546 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 LILRB1Q8NHL6 650 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 NEUROG1Q92886 237 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 TMEM45BQ96B21 275 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 KTI12Q96EK9 354 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 SF3B5Q9BWJ5 86 aaKnown RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 KAT8Q9H7Z6 458 aaKnown RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 C12orf10Q9HB07 376 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 NGBQ9NPG2 151 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 SLC7A10Q9NS82 523 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 NPAP1Q9NZP6 1156 aa15.8■□□□□ 0.12
UPF3A-203ENST00000474056 TESQ9UGI8 421 aaKnown RBP15.8■□□□□ 0.12
UPF3A-203ENST00000474056 A0A1W2PR80 420 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 PRORSD1PA6NEY8 169 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 DPRXA6NFQ7 191 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 OR5H1A6NKK0 313 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 CLOCKO15516 846 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 TPST2O60704 377 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 SERPINB7O75635 380 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 CD3EP07766 207 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 VIMP08670 466 aaKnown RBP15.79■□□□□ 0.12
UPF3A-203ENST00000474056 RGS8P57771 180 aaPredicted RBP15.79■□□□□ 0.12
UPF3A-203ENST00000474056 NCALDP61601 193 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 BSPH1Q075Z2 132 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 RBBP4Q09028 425 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 ALG10BQ5I7T1 473 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 C9orf135Q5VTT2 229 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 NET1Q7Z628 596 aaPredicted RBP15.79■□□□□ 0.12
UPF3A-203ENST00000474056 LRRC75A-AS1Q8N1F1 130 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 OR52N5Q8NH56 324 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 OR10A6Q8NH74 314 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 MFSD8Q8NHS3 518 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 IGFBPL1Q8WX77 278 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 SLC25A36Q96CQ1 311 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 MUCL1Q96DR8 90 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 ESRP2Q9H6T0 727 aaKnown RBP15.79■□□□□ 0.12
UPF3A-203ENST00000474056 DLL4Q9NR61 685 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 PARPBPQ9NWS1 579 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 TAS2R16Q9NYV7 291 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 UPB1Q9UBR1 384 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 SEC14L4Q9UDX3 406 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 ZFHX3Q15911 3703 aa15.79■□□□□ 0.12
UPF3A-203ENST00000474056 IGKV1D-42A0A075B6H8 117 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 PNMTP11086 282 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 OR1Q1Q15612 314 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 TRMT5Q32P41 509 aaKnown RBP15.78■□□□□ 0.12
UPF3A-203ENST00000474056 Q5PR19 223 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 TMEM225Q6GV28 225 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 AAED1Q7RTV5 226 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 P2RY8Q86VZ1 359 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 P3H2Q8IVL5 708 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 ZNF611Q8N823 705 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 BHLHE22Q8NFJ8 381 aaPredicted RBP15.78■□□□□ 0.12
UPF3A-203ENST00000474056 KBTBD8Q8NFY9 601 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 DNAJA4Q8WW22 397 aaPredicted RBP15.78■□□□□ 0.12
UPF3A-203ENST00000474056 PERPQ96FX8 193 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 TRIM2Q9C040 744 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 SLC13A4Q9UKG4 626 aa15.78■□□□□ 0.12
UPF3A-203ENST00000474056 A0A0B4J2E0 115 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 A0A1B0GX12 115 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 M0QX08 132 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms