RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 FUT4P22083 530 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 MYF6P23409 242 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 GRPRP30550 384 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 MYBPHQ13203 477 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 C1DQ13901 141 aaKnown RBP9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 GINS1Q14691 196 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 SNAPC1Q16533 368 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 TMEM44Q2T9K0 475 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 ALG10Q5BKT4 473 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 CMPK2Q5EBM0 449 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 FAM180AQ6UWF9 173 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 THAP5Q7Z6K1 395 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 JAZF1Q86VZ6 243 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF786Q8N393 782 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 TMEM251Q8N6I4 163 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 SCAIQ8N9R8 606 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 TAAR8Q969N4 342 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 RELTQ969Z4 430 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 OTULINQ96BN8 352 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 HRASLS5Q96KN8 279 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 SAMD8Q96LT4 415 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 Q96MT0 163 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 MUS81Q96NY9 551 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 KLHDC3Q9BQ90 382 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 POLDIP3Q9BY77 421 aaKnown RBP9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 GRIP2Q9C0E4 1043 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 PAQR5Q9NXK6 330 aaPredicted RBP9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 SCN3BQ9NY72 215 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 TVP23BQ9NYZ1 205 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 GRHPRQ9UBQ7 328 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 B3GNT3Q9Y2A9 372 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 CFAP54Q96N23 3096 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 MED19A0JLT2 244 aaPredicted RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ZC3H12DA2A288 527 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ZAR1LA6NP61 321 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 NPIPA5E9PKD4 350 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 C11orf98E9PRG8 122 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 M0R082 166 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 CDC42EP2O14613 210 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ADAM10O14672 748 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 AKAP8O43823 692 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TNFAIP8O95379 198 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 SYNGR4O95473 234 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 PMS2P2O95744 297 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ACTL6AO96019 429 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 BGLAPP02818 100 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 OPN1LWP04000 364 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 RFPL3SP0C7P2 107 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 EEF1B2P24534 225 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 GRK5P34947 590 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 EIF1AXP47813 144 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ADARB1P78563 741 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 MYBPC1Q00872 1141 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 EGR4Q05215 589 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 PUDPQ08623 228 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 FOXO1Q12778 655 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TOP3AQ13472 1001 aaPredicted RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 HYAL4Q2M3T9 481 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 PGGHGQ32M88 737 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF691Q5VV52 312 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 SLX4IPQ5VYV7 408 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 HBMQ6B0K9 141 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TMEM225Q6GV28 225 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 DPY19L2P2Q6ZN68 376 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ESPNLQ6ZVH7 1005 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 H1FNTQ75WM6 255 aaPredicted RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 SLC46A3Q7Z3Q1 461 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 MARVELD2Q8N4S9 558 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 IQCF1Q8N6M8 205 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF417Q8TAU3 575 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 POC1BQ8TC44 478 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TRUB1Q8WWH5 349 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ABTB1Q969K4 478 aaPredicted RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ERMAPQ96PL5 475 aaPredicted RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 NR1H4Q96RI1 486 aaPredicted RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TNFRSF13CQ96RJ3 184 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF587Q96SQ5 575 aaPredicted RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 PITX2Q99697 317 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 PRRG4Q9BZD6 226 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 DEFB127Q9H1M4 99 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 UBQLN3Q9H347 655 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 SLC25A19Q9HC21 320 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 CHST11Q9NPF2 352 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 INIPQ9NRY2 104 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 RASSF1Q9NS23 344 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 MRPL39Q9NYK5 338 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 IL20Q9NYY1 176 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 REV1Q9UBZ9 1251 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 IL20RAQ9UHF4 553 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 KLHL21Q9UJP4 597 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TUBD1Q9UJT1 453 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 NDRG4Q9ULP0 352 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 NPIPA1Q9UND3 350 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 SIGLEC7Q9Y286 467 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TRAPPC4Q9Y296 219 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TP53TG5Q9Y2B4 290 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 B3GALT5Q9Y2C3 310 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms