RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 A0A1W2PR80 420 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 AQP7P3A6NL99 342 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 A8MVM7 634 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 INAFM1C9JVW0 142 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 RNF223E7ERA6 249 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 NPIPB7O75200 414 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 NDUFS7O75251 213 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 AKR7A3O95154 331 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 BMP2P12643 396 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 PRG2P13727 222 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 TTKP33981 857 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 ACVR1BP36896 505 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 MRPL19P49406 292 aaKnown RBP13.42□□□□□ -0.26
VTI1A-203ENST00000472892 PPP2R2BQ00005 443 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 KRTAP1-1Q07627 177 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 BNIP2Q12982 314 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 RGNQ15493 299 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 OR7A5Q15622 319 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 RPS26P11Q5JNZ5 115 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-203ENST00000472892 C6orf10Q5SRN2 563 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 PRAMEF8Q5VWM4 474 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 PRAMEF7Q5VXH5 474 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 SLC22A25Q6T423 547 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 PRIMA1Q86XR5 153 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 CADM2Q8N3J6 435 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 C17orf78Q8N4C9 275 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 OR9K2Q8NGE7 335 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 TMEM19Q96HH6 336 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 BOD1Q96IK1 185 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 ZNF385AQ96PM9 386 aaKnown RBP13.42□□□□□ -0.26
VTI1A-203ENST00000472892 DHRS9Q9BPW9 319 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 ARMC7Q9H6L4 198 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 BARX1Q9HBU1 254 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-203ENST00000472892 GDF2Q9UK05 429 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-203ENST00000472892 B3GALT5Q9Y2C3 310 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 IFT52Q9Y366 437 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
VTI1A-203ENST00000472892 A0A096LPI6 279 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 TMEM247A6NEH6 219 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 CLIC1O00299 241 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 HOXB9P17482 250 aaPredicted RBP13.41□□□□□ -0.26
VTI1A-203ENST00000472892 PTNP21246 168 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 MPGP29372 298 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 P2RY4P51582 365 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 TGFBR3Q03167 851 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 SPOCK1Q08629 439 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 TMEM225Q6GV28 225 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 SLC2A7Q6PXP3 512 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 AAED1Q7RTV5 226 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 SERPINA11Q86U17 422 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 DEPDC4Q8N2C3 294 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 SLC35B4Q969S0 331 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 C7orf26Q96N11 449 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 TAPBPLQ9BX59 468 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 C1QTNF6Q9BXI9 259 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 RAD21L1Q9H4I0 556 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 A4GALTQ9NPC4 353 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 SLC17A5Q9NRA2 495 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 CBLN4Q9NTU7 201 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 AMDHD2Q9Y303 409 aa13.41□□□□□ -0.26
VTI1A-203ENST00000472892 M0R1B8 84 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 VAMP5O95183 116 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 TGDSO95455 350 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 NCF2P19878 526 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-203ENST00000472892 FADDQ13158 208 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 NRF1Q16656 503 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 ZNF311Q5JNZ3 666 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 C9orf135Q5VTT2 229 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 C1orf140Q5VVS0 124 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 C11orf71Q6IPW1 123 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 B3GLCTQ6Y288 498 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 FUNDC1Q8IVP5 155 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 POMGNT2Q8NAT1 580 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 MAPK1IP1LQ8NDC0 245 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 STK35Q8TDR2 534 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 MAL2Q969L2 176 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 C3orf49Q96BT1 292 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 HS6ST2Q96MM7 605 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 CACYBPQ9HB71 228 aaKnown RBP13.4□□□□□ -0.26
VTI1A-203ENST00000472892 POU2F3Q9UKI9 436 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 DNHD1Q96M86 4753 aa13.4□□□□□ -0.26
VTI1A-203ENST00000472892 JMJD1CQ15652 2540 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 TMEM229AB2RXF0 380 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 FRS3O43559 492 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 IDH3AP50213 366 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 PRPS1P60891 318 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 IRX1P78414 480 aaPredicted RBP13.39□□□□□ -0.27
VTI1A-203ENST00000472892 SLC25A3Q00325 362 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 LRIF1Q5T3J3 769 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 ZNF544Q6NX49 715 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 BLOC1S3Q6QNY0 202 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 CREB3L2Q70SY1 520 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 GPAT4Q86UL3 456 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 EPHX4Q8IUS5 362 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 FBXL14Q8N1E6 418 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 MUC15Q8N387 334 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 MFSD8Q8NHS3 518 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 BBS10Q8TAM1 723 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms