RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 A0A1W2PRQ8 180 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 FTCDNL1E5RQL4 147 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 DVL2O14641 736 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 FFAR1O14842 300 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 SMAD9O15198 467 aaKnown RBP17.85■□□□□ 0.45
SF1-213ENST00000472725 SS18L1O75177 396 aaPredicted RBP17.85■□□□□ 0.45
SF1-213ENST00000472725 VAMP5O95183 116 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 MAGEA2P43356 314 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 DGCR6Q14129 220 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 GUSBP1Q15486 140 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 OR7A5Q15622 319 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 SLC25A35Q3KQZ1 300 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 IQCCQ4KMZ1 466 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 TSEN54Q7Z6J9 526 aaKnown RBP17.85■□□□□ 0.45
SF1-213ENST00000472725 RNF113BQ8IZP6 322 aaKnown RBP17.85■□□□□ 0.45
SF1-213ENST00000472725 SDCCAG3Q96C92 435 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 KTI12Q96EK9 354 aaPredicted RBP17.85■□□□□ 0.45
SF1-213ENST00000472725 NMNAT1Q9HAN9 279 aaPredicted RBP17.85■□□□□ 0.45
SF1-213ENST00000472725 BCO1Q9HAY6 547 aa17.85■□□□□ 0.45
SF1-213ENST00000472725 PLGP00747 810 aaPredicted RBP17.84■□□□□ 0.45
SF1-213ENST00000472725 RAP2AP10114 183 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 GTF2E2P29084 291 aaKnown RBP17.84■□□□□ 0.45
SF1-213ENST00000472725 RPS5P46782 204 aaKnown RBP17.84■□□□□ 0.45
SF1-213ENST00000472725 SLC16A1P53985 500 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 ABLIM2Q6H8Q1 611 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 PPP4R4Q6NUP7 873 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 WDR88Q6ZMY6 472 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 NCCRP1Q6ZVX7 275 aaPredicted RBP17.84■□□□□ 0.45
SF1-213ENST00000472725 FAM214BQ7L5A3 538 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 ZDHHC21Q8IVQ6 265 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 SCAIQ8N9R8 606 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 NAXEQ8NCW5 288 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 ADPRHL1Q8NDY3 354 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 CA5BP1Q8WTZ4 195 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 TMEM239Q8WW34 195 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 ROBO4Q8WZ75 1007 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 TAAR8Q969N4 342 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 INTS12Q96CB8 462 aaKnown RBP17.84■□□□□ 0.45
SF1-213ENST00000472725 DHRS1Q96LJ7 313 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 SF3B5Q9BWJ5 86 aaKnown RBP17.84■□□□□ 0.45
SF1-213ENST00000472725 PIGMQ9H3S5 423 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 B3GALT5Q9Y2C3 310 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 EMC9Q9Y3B6 208 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 MED31Q9Y3C7 131 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 V9GYQ6 96 aa17.84■□□□□ 0.45
SF1-213ENST00000472725 PCNX1Q96RV3 2341 aa17.83■□□□□ 0.45
SF1-213ENST00000472725 IGKV3D-15A0A087WSY6 115 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 A0A1W2PNV4 684 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 AQP7P3A6NL99 342 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 ZNF724A8MTY0 619 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 J3KTA2 159 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 GPR171O14626 319 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 CLDN14O95500 239 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 MT-ND1P03886 318 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 H1F0P07305 194 aaKnown RBP17.83■□□□□ 0.44
SF1-213ENST00000472725 YAP1P46937 504 aaKnown RBP17.83■□□□□ 0.44
SF1-213ENST00000472725 RASGEF1BQ0VAM2 473 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 NKAIN4Q8IVV8 208 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 ACOT11Q8WXI4 607 aaPredicted RBP17.83■□□□□ 0.44
SF1-213ENST00000472725 SEPHS2Q99611 448 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 FKRPQ9H9S5 495 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 MAN2C1Q9NTJ4 1040 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 EMC3Q9P0I2 261 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 KLHL13Q9P2N7 655 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 RASD1Q9Y272 281 aa17.83■□□□□ 0.44
SF1-213ENST00000472725 HELZ2Q9BYK8 2649 aaKnown RBP17.82■□□□□ 0.44
SF1-213ENST00000472725 INTS1Q8N201 2190 aaKnown RBP17.82■□□□□ 0.44
SF1-213ENST00000472725 TCRBV3S1A0A5B6 114 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 DHRS12A0PJE2 317 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 hCG_2039718K7EN88 272 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 CIB2O75838 187 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 TNFSF13O75888 250 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 KRT36O76013 467 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 BGLAPP02818 100 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 YES1P07947 543 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 CTBP2P56545 445 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 OTUD3Q5T2D3 398 aaPredicted RBP17.82■□□□□ 0.44
SF1-213ENST00000472725 MAMDC2Q7Z304 686 aaPredicted RBP17.82■□□□□ 0.44
SF1-213ENST00000472725 CCDC71Q8IV32 467 aaPredicted RBP17.82■□□□□ 0.44
SF1-213ENST00000472725 OR6K3Q8NGY3 331 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 LIPHQ8WWY8 451 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 PSD2Q9BQI7 771 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 ASPNQ9BXN1 380 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 YY1AP1Q9H869 796 aa17.82■□□□□ 0.44
SF1-213ENST00000472725 MRPL39Q9NYK5 338 aaKnown RBP17.82■□□□□ 0.44
SF1-213ENST00000472725 LOC102725191A0A1B0GVB3 256 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 KIR2DL2P43627 348 aaPredicted RBP17.81■□□□□ 0.44
SF1-213ENST00000472725 GK3PQ14409 553 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 POU4F3Q15319 338 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 ZNF74Q16587 644 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 TMEM201Q5SNT2 666 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 PLXDC2Q6UX71 529 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 H1FNTQ75WM6 255 aaPredicted RBP17.81■□□□□ 0.44
SF1-213ENST00000472725 RRM2BQ7LG56 351 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 SPATA24Q86W54 205 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 ADGRG5Q8IZF4 528 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 GCNT2Q8N0V5 402 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 TMEM99Q8N816 258 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 ABHD3Q8WU67 409 aa17.81■□□□□ 0.44
SF1-213ENST00000472725 TMEM255BQ8WV15 326 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms