RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 FAR1Q8WVX9 515 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 ADGRG7Q96K78 797 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 GPR137Q96N19 417 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 USE1Q9NZ43 259 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 TMEM5Q9Y2B1 443 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 HDGFL3Q9Y3E1 203 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 PRRC2CQ9Y520 2896 aaKnown RBP17.23■□□□□ 0.35
PSPC1-203ENST00000471658 TRAV27A0A087WT01 109 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 TP53P04637 393 aaPredicted RBP17.23■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF708P17019 499 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 IGFBP5P24593 272 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 FPR3P25089 353 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 FKBP2P26885 142 aaKnown RBP17.23■□□□□ 0.35
PSPC1-203ENST00000471658 GRPRP30550 384 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 DIO1P49895 249 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 FHL1Q13642 323 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 ZIK1Q3SY52 487 aaPredicted RBP17.23■□□□□ 0.35
PSPC1-203ENST00000471658 C5orf46Q6UWT4 87 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 FGD2Q7Z6J4 655 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 KIF18BQ86Y91 864 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 OR51A7Q8NH64 312 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 MFSD8Q8NHS3 518 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 OSTF1Q92882 214 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 WBP1Q96G27 269 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 WDYHV1Q96HA8 205 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 TNFRSF13CQ96RJ3 184 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 SRXN1Q9BYN0 137 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF556Q9HAH1 456 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 KRCC1Q9NPI7 259 aaPredicted RBP17.23■□□□□ 0.35
PSPC1-203ENST00000471658 NANSQ9NR45 359 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 KRT84Q9NSB2 600 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 REV1Q9UBZ9 1251 aa17.23■□□□□ 0.35
PSPC1-203ENST00000471658 CACNA1BQ00975 2339 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 UNC119BA6NIH7 251 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 NPIPA2E9PIF3 369 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 NPIPA3F8WFD2 350 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 SULT2B1O00204 365 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 DLGAP1O14490 977 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 OR2T1O43869 369 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 CXCL13O43927 109 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 SOX14O95416 240 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 IGF2P01344 180 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 ASAH2BP0C7U1 165 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 POLR2IP36954 125 aaKnown RBP17.22■□□□□ 0.35
PSPC1-203ENST00000471658 PLXDC2Q6UX71 529 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 CHERPQ8IWX8 916 aaKnown RBP17.22■□□□□ 0.35
PSPC1-203ENST00000471658 OR2V1Q8NHB1 315 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 MIB2Q96AX9 1013 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 ENKD1Q9H0I2 346 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 EGLN3Q9H6Z9 239 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 PAPOLBQ9NRJ5 636 aaKnown RBP17.22■□□□□ 0.35
PSPC1-203ENST00000471658 DNAJC13O75165 2243 aa17.22■□□□□ 0.35
PSPC1-203ENST00000471658 GJE1A6NN92 205 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 TTLL8A6PVC2 850 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF814B7Z6K7 855 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 AQP7O14520 342 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 PTP4A3O75365 173 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 AKR7A3O95154 331 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 SNAP29O95721 258 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 EIF1AXP47813 144 aaKnown RBP17.21■□□□□ 0.35
PSPC1-203ENST00000471658 TDGF1P3P51864 188 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 FXYD6P3P58550 94 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 NFATC3Q12968 1075 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 BCL2A1Q16548 175 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 HBMQ6B0K9 141 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 ESPNLQ6ZVH7 1005 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 OAFQ86UD1 273 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 OR6S1Q8NH40 331 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 OR10D3Q8NH80 312 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 LIPHQ8WWY8 451 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF845Q96IR2 970 aaPredicted RBP17.21■□□□□ 0.35
PSPC1-203ENST00000471658 TAPBPLQ9BX59 468 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 FKRPQ9H9S5 495 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 IL20RAQ9UHF4 553 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 CAMK2AQ9UQM7 478 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 TRAPPC4Q9Y296 219 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 IGHV3-15A0A0B4J1V0 119 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 M0R082 166 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 PMS2P2O95744 297 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 VHLP40337 213 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 MLLT10P55197 1068 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 CARD18P57730 90 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 CD300LDQ6UXZ3 194 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 MAMDC2Q7Z304 686 aaPredicted RBP17.21■□□□□ 0.35
PSPC1-203ENST00000471658 TMEM99Q8N816 258 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 OR5M9Q8NGP3 310 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 MOSPD2Q8NHP6 518 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF417Q8TAU3 575 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF587Q96SQ5 575 aaPredicted RBP17.21■□□□□ 0.35
PSPC1-203ENST00000471658 PLA2G12AQ9BZM1 189 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 RASSF4Q9H2L5 321 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 MCCC2Q9HCC0 563 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF229Q9UJW7 825 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 SIGLEC7Q9Y286 467 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 POFUT2Q9Y2G5 429 aa17.21■□□□□ 0.35
PSPC1-203ENST00000471658 BLOC1S5-TXNDC5H3BN57 136 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 RAMP1O60894 148 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 HPRP00739 348 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 MT-ATP6P00846 226 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 CPN1P15169 458 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms