RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ZHX1-C8orf76Q96EF9 292 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 LRGUKQ96M69 825 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZNF300Q96RE9 604 aaPredicted RBP13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 EPYCQ99645 322 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 GP6Q9HCN6 339 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 IL1RAPQ9NPH3 570 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 V9GYQ6 96 aa13.36□□□□□ -0.27
CDC42SE1-203ENST00000470278 TRAV36DV7A0A075B6V5 113 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 A0A0G2JNJ9 132 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 HSPB2A8KAH6 182 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 FTCDNL1E5RQL4 147 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 SMAD9O15198 467 aaKnown RBP13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 OR2T1O43869 369 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 EIF1BO60739 113 aaKnown RBP13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 AQP8O94778 261 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 IL2RAP01589 272 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 FABP3P05413 133 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 GPIP06744 558 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 RHCEP18577 417 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 ENPP1P22413 925 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 SMSP52788 366 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 SLC35A1P78382 337 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 RNPS1Q15287 305 aaKnown RBP13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 GUSBP1Q15486 140 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 HSPB2Q16082 182 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 ABLIM2Q6H8Q1 611 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 PAQR6Q6TCH4 344 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 NCCRP1Q6ZVX7 275 aaPredicted RBP13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 P4HA3Q7Z4N8 544 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 SLC43A2Q8N370 569 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 NAXEQ8NCW5 288 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 MFSD8Q8NHS3 518 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 KTI12Q96EK9 354 aaPredicted RBP13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 DHRS1Q96LJ7 313 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 GLRX2Q9NS18 164 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 MAN2C1Q9NTJ4 1040 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 Q9UFV3 132 aa13.35□□□□□ -0.27
CDC42SE1-203ENST00000470278 MED12LQ86YW9 2145 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 A0A1W2PRQ8 180 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 HTR3EA5X5Y0 456 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 J3KTA2 159 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 CYTIPO60759 359 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZG16O60844 167 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 SS18L1O75177 396 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 IL18BPO95998 194 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 UMPSP11172 480 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 CHRNB4P30926 498 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 DGCR6Q14129 220 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 MFSD13AQ14CX5 517 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 EEF1A1P5Q5VTE0 462 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 TTC33Q6PID6 262 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 PLXDC2Q6UX71 529 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 FCRLAQ7L513 359 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZNF808Q8N4W9 903 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 PIK3C3Q8NEB9 887 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 RNF217Q8TC41 542 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 ITLN2Q8WWU7 325 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 GMPPAQ96IJ6 420 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 HS6ST2Q96MM7 605 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZNF347Q96SE7 839 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 PIP5K1AQ99755 562 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 FNDC11Q9BVV2 318 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 SFXN3Q9BWM7 321 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 TAPBPLQ9BX59 468 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 NMNAT1Q9HAN9 279 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 COQ3Q9NZJ6 369 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZNF629Q9UEG4 869 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 RNF6Q9Y252 685 aa13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
CDC42SE1-203ENST00000470278 TCRBV3S1A0A5B6 114 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 MT-ATP6P00846 226 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 TMIGD3P0DMS9 266 aaPredicted RBP13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 FPR1P21462 350 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 RPS5P46782 204 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 YAP1P46937 504 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 OR2B6P58173 313 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 TRAM2Q15035 370 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 PDK3Q15120 406 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 OR7A5Q15622 319 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 FAM98BQ52LJ0 330 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 GTF2IRD2BQ6EKJ0 949 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 XKRXQ6PP77 449 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 GTF2IRD2Q86UP8 949 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZDHHC21Q8IVQ6 265 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 NKAIN4Q8IVV8 208 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 ADGRG5Q8IZF4 528 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 PIGXQ8TBF5 258 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 ABHD3Q8WU67 409 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 TMEM255BQ8WV15 326 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 TMEM239Q8WW34 195 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 ASB5Q8WWX0 329 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 TAAR8Q969N4 342 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 UTP4Q969X6 686 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 TACO1Q9BSH4 297 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 PRRG4Q9BZD6 226 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 KLHL4Q9C0H6 718 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 BCO1Q9HAY6 547 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 KLHL9Q9P2J3 617 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms