RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 WDR4P57081 412 aaKnown RBP15.32■□□□□ 0.04
COL7A1-208ENST00000470076 PRPS1P60891 318 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 OR7A5Q15622 319 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 PDCD4Q53EL6 469 aaKnown RBP15.32■□□□□ 0.04
COL7A1-208ENST00000470076 NXNQ6DKJ4 435 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 WBP2NLQ6ICG8 309 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 KLHL24Q6TFL4 600 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 ZNF836Q6ZNA1 936 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 AAED1Q7RTV5 226 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 ABHD12BQ7Z5M8 362 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-208ENST00000470076 VRK2Q86Y07 508 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM99Q8N816 258 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 ZIC4Q8N9L1 334 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 OR9K2Q8NGE7 335 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 ATP23Q9Y6H3 246 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM120BA0PK00 339 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ELOA3DA6NLF2 546 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 A8MV72 311 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 A8MVM7 634 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 AKR7A3O95154 331 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 VAMP5O95183 116 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ANP32DO95626 131 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 TFPTP0C1Z6 253 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 GKN3PP0CG01 181 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 KITP10721 976 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 APOBEC3AP31941 199 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 CRATP43155 626 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 DSTNP60981 165 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 SLC25A3Q00325 362 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 CHRNB3Q05901 458 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 LARS2Q15031 903 aaKnown RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ELOA3BQ3SY89 546 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 RNF220Q5VTB9 566 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ATG16L1Q676U5 607 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM225Q6GV28 225 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 MSANTD1Q6ZTZ1 278 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 CADM2Q8N3J6 435 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ELOA3Q8NG57 546 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 BOD1Q96IK1 185 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 MAELQ96JY0 434 aaKnown RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ZNF385AQ96PM9 386 aaKnown RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 TAPBPLQ9BX59 468 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ARMC7Q9H6L4 198 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 RMND5AQ9H871 391 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 TPT1P8Q9HAU6 139 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 SLC6A13Q9NSD5 602 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 THUMPD1Q9NXG2 353 aaKnown RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 ZNF232Q9UNY5 417 aa15.31■□□□□ 0.04
COL7A1-208ENST00000470076 YLPM1P49750 1951 aaKnown RBP15.31■□□□□ 0.04
COL7A1-208ENST00000470076 A0A096LNT2 108 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 A0A096LPI6 279 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM247A6NEH6 219 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 IFNA2P01563 188 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 BCHEP06276 602 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 ETFAP13804 333 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 SLC25A16P16260 332 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 LOXL1Q08397 574 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-208ENST00000470076 ARFGEF3Q5TH69 2177 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 HMBOX1Q6NT76 420 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 PODNL1Q6PEZ8 512 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 GPAT4Q86UL3 456 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 SLC38A5Q8WUX1 472 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 ZBTB9Q96C00 473 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 ITCHQ96J02 903 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 TNFRSF13CQ96RJ3 184 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 CACYBPQ9HB71 228 aaKnown RBP15.3■□□□□ 0.04
COL7A1-208ENST00000470076 OBP2BQ9NPH6 170 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 SDR39U1Q9NRG7 319 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-208ENST00000470076 ZIM2Q9NZV7 527 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 ZNF443Q9Y2A4 671 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-208ENST00000470076 PMF1-BGLAPU3KQ54 211 aa15.3■□□□□ 0.04
COL7A1-208ENST00000470076 A0A0G2JPF8 293 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 OR6C65A6NJZ3 312 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 HNRNPCL2B2RXH8 293 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 HNRNPCL3B7ZW38 293 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 GPRIN2O60269 458 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 HNRNPCL1O60812 293 aaKnown RBP15.29■□□□□ 0.04
COL7A1-208ENST00000470076 KRT33AO76009 404 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 HNRNPCL4P0DMR1 293 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 NCF2P19878 526 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-208ENST00000470076 PAX7P23759 505 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 EFNA4P52798 201 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 SLC18A1P54219 525 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM249Q2WGJ8 235 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 CHRFAM7AQ494W8 412 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 LSRQ86X29 649 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-208ENST00000470076 ZNF525Q8N782 197 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 MGARPQ8TDB4 240 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 FAM168AQ92567 244 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 HTRA1Q92743 480 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 AURKBQ96GD4 344 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-208ENST00000470076 SPATA9Q9BWV2 254 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM45AQ9NWC5 275 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 ADPRHL2Q9NX46 363 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 IFT52Q9Y366 437 aa15.29■□□□□ 0.04
COL7A1-208ENST00000470076 ATP6V1G2-DDX39BF2Z307 99 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 FRS3O43559 492 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 CSF3P09919 207 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 PRG2P13727 222 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 CDH2P19022 906 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms