RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 LRRC46Q96FV0 321 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 CCDC120Q96HB5 630 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF845Q96IR2 970 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 DHRS1Q96LJ7 313 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 PIGMQ9H3S5 423 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 BCO1Q9HAY6 547 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 CCM2LQ9NUG4 571 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 EMC3Q9P0I2 261 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 SH3BGRL2Q9UJC5 107 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 RASD1Q9Y272 281 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 EMC9Q9Y3B6 208 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 IGKV1D-42A0A075B6H8 117 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 IGKV3D-15A0A087WSY6 115 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 ZC3H12DA2A288 527 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 AQP7P3A6NL99 342 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 FFAR1O14842 300 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 TGM6O95932 706 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 PLGP00747 810 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 THY1P04216 161 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 HIST1H2ABP04908 130 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 YES1P07947 543 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 TMIGD3P0DMS9 266 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 IMPDH2P12268 514 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 PCYT1AP49585 367 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 CTBP2P56545 445 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 ZSCAN26Q16670 478 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 SLC25A35Q3KQZ1 300 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 TMEM225Q6GV28 225 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 C3P1Q6ZMU1 363 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 MBOAT2Q6ZWT7 520 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 FAM214BQ7L5A3 538 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 HIST3H2AQ7L7L0 130 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 TSEN54Q7Z6J9 526 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 SPATA24Q86W54 205 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 MARVELD2Q8N4S9 558 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 TAAR8Q969N4 342 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 KTI12Q96EK9 354 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 DUS3LQ96G46 650 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 SEPHS2Q99611 448 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 CHID1Q9BWS9 393 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 ASPNQ9BXN1 380 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 FKRPQ9H9S5 495 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 FANCFQ9NPI8 374 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 PARPBPQ9NWS1 579 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 MRPL39Q9NYK5 338 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF229Q9UJW7 825 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 TMCC3Q9ULS5 477 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 TMEM5Q9Y2B1 443 aa11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 UBR5O95071 2799 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-204ENST00000469778 A0A0G2JNJ9 132 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 hCG_2039718K7EN88 272 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 SS18L1O75177 396 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 TOXO94900 526 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 GADD45GO95257 159 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 LDLRP01130 860 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 RPS5P46782 204 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 RASGEF1BQ0VAM2 473 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 POU4F3Q15319 338 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 TAF11Q15544 211 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 OR7A5Q15622 319 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF74Q16587 644 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 TMEM201Q5SNT2 666 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF730Q6ZMV8 503 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 H1FNTQ75WM6 255 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 MRGPRGQ86SM5 289 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 TSPYL5Q86VY4 417 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 C9orf106Q8NAJ2 232 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 SSC4DQ8WTU2 575 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 CA5BP1Q8WTZ4 195 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 PTDSS2Q9BVG9 487 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 SRXN1Q9BYN0 137 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 NANSQ9NR45 359 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 MAN2C1Q9NTJ4 1040 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 KLHL13Q9P2N7 655 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 Q9UFV3 132 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 AURKCQ9UQB9 309 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 SPENQ96T58 3664 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 MED12Q93074 2177 aa11.28□□□□□ -0.6
SPTLC1-204ENST00000469778 HIVEP3Q5T1R4 2406 aa11.27□□□□□ -0.6
SPTLC1-204ENST00000469778 PHF3Q92576 2039 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 OR6C65A6NJZ3 312 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 SMAD9O15198 467 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 AQP8O94778 261 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 OR6A2O95222 327 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 CNOT4O95628 575 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 BGLAPP02818 100 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 CD8BP10966 210 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 FCGR1AP12314 374 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 PEX19P40855 299 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 YAP1P46937 504 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 SLC9A3P48764 834 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 ACTR3P61158 418 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 ADORA2A-AS1P86434 159 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 PRKCDQ05655 676 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 ZP4Q12836 540 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 OTUD3Q5T2D3 398 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms