RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 ZFP3Q96NJ6 502 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 BBC3Q96PG8 261 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 DDOQ99489 341 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 PCBD2Q9H0N5 130 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SLC38A1Q9H2H9 487 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 OR6C2Q9NZP2 312 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 PFDN2Q9UHV9 154 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 IGSF10Q6WRI0 2623 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SLC22A23A1A5C7 686 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GSAPA4D1B5 854 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 HMSDA8MTL9 139 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SNRPGP15A8MWD9 76 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 E9PI62 339 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GALR3O60755 368 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 LEFTY1O75610 366 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 ARL6IP5O75915 188 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 HMGN2P05204 90 aaKnown RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 CD1AP06126 327 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 PRKACAP17612 351 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 CXCL2P19875 107 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 AHRP35869 848 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 EIF2S3P41091 472 aaKnown RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 NCBP2P52298 156 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC3-205ENST00000469550 TGM3Q08188 693 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 PLBD1Q6P4A8 553 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GLDNQ6ZMI3 551 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 Q6ZTK2 550 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 OLIG3Q7RTU3 272 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 OVCH1Q7RTY7 1134 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GDF7Q7Z4P5 450 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 UBE3DQ7Z6J8 389 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 LNX2Q8N448 690 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TMIEQ8NEW7 156 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 FAM174AQ8TBP5 190 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 THAP4Q8WY91 577 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 KAT2AQ92830 837 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 PMEPA1Q969W9 287 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 ART5Q96L15 291 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SAMD8Q96LT4 415 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GSDMCQ9BYG8 508 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SLC6A15Q9H2J7 730 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 HRASLSQ9HDD0 168 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 HAO2Q9NYQ3 351 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GPR34Q9UPC5 381 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GPR55Q9Y2T6 319 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 FASNP49327 2511 aaKnown RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 WDFY3Q8IZQ1 3526 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 NBEAQ8NFP9 2946 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 OR2M5A3KFT3 312 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 AIPO00170 330 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 BHLHE40O14503 412 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 SULT1B1O43704 296 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 TLX3O43711 291 aaPredicted RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 GATBO75879 557 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 TOXO94900 526 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 HRGP04196 525 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 THY1P04216 161 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ALDOBP05062 364 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ZGLP1P0C6A0 271 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ATF1P18846 271 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 TBXA2RP21731 343 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 GPR4P46093 362 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ACTC1P68032 377 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ACTA1P68133 377 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 E2F1Q01094 437 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 SLC3A1Q07837 685 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 LASP1Q14847 261 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 ZSWIM7Q19AV6 140 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 CCDC157Q569K6 752 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ZNF805Q5CZA5 627 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ARSIQ5FYB1 569 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 UBE2NLQ5JXB2 153 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 C6orf132Q5T0Z8 1188 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR4C11Q6IEV9 310 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 RPL13AP3Q6NVV1 102 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 SZRD1Q7Z422 152 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 DCUN1D3Q8IWE4 304 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 RNF113BQ8IZP6 322 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 BVESQ8NE79 360 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 OR2L2Q8NH16 312 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 PHYHIPQ92561 330 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 RIT1Q92963 219 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ELP4Q96EB1 424 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 ELMOD3Q96FG2 381 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 SLC41A3Q96GZ6 507 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 BBS4Q96RK4 519 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 MCHR1Q99705 422 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 DPH7Q9BTV6 452 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 SARGQ9BW04 601 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 PRORYQ9H606 182 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 BRD7Q9NPI1 651 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 IFT46Q9NQC8 304 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 GPR27Q9NS67 375 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 TAS2R5Q9NYW4 299 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 IL20RAQ9UHF4 553 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 BAIAP2Q9UQB8 552 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 MRPS7Q9Y2R9 242 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 PCDHGA9Q9Y5G4 932 aaKnown RBP8.81□□□□□ -1
HDAC3-205ENST00000469550 KNTC1P50748 2209 aa8.81□□□□□ -1
HDAC3-205ENST00000469550 COL27A1Q8IZC6 1860 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms