RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 GRAMD1BQ3KR37 738 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 ENTPD8Q5MY95 495 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 OR5M10Q6IEU7 315 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 SLC22A25Q6T423 547 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 UGT2A3Q6UWM9 527 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 C4orf22Q6V702 233 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 TFAP2EQ6VUC0 442 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 Q6ZSR9 355 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 BHLHA15Q7RTS1 189 aaPredicted RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 TBC1D1Q86TI0 1168 aaPredicted RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 PRUNE1Q86TP1 453 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 ZCCHC7Q8N3Z6 543 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 UBL4BQ8N7F7 174 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 ZNF540Q8NDQ6 660 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 OR2M3Q8NG83 312 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 ZNF473Q8WTR7 871 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 TMCO6Q96DC7 493 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 MTBPQ96DY7 904 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 WDR34Q96EX3 536 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 PDLIM5Q96HC4 596 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 FOXN4Q96NZ1 517 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 COL21A1Q96P44 957 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 SERPINB12Q96P63 405 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 EGFL8Q99944 293 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 ARPC5LQ9BPX5 153 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 SF3B5Q9BWJ5 86 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 CAPS2Q9BXY5 557 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 ITPAQ9BY32 194 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 CADM1Q9BY67 442 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 PRRG4Q9BZD6 226 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 DDX47Q9H0S4 455 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 RBM38Q9H0Z9 239 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 FOLH1BQ9HBA9 442 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 PNRC2Q9NPJ4 139 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 C20orf96Q9NUD7 363 aaPredicted RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 LYARQ9NX58 379 aaKnown RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 MED29Q9NX70 200 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 PAQR5Q9NXK6 330 aaPredicted RBP3.58□□□□□ -1.84
SSR3-204ENST00000467733 POU2F3Q9UKI9 436 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 CFL2Q9Y281 166 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 ZNF337Q9Y3M9 751 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 PTGDR2Q9Y5Y4 395 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 AP4B1Q9Y6B7 739 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 DNAH3Q8TD57 4116 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
SSR3-204ENST00000467733 A0A0A6YYD5 115 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 RPS10-NUDT3A0A1W2PQS6 291 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 LRP5LA4QPB2 252 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 FAM90A20PA6NIJ5 464 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 GLOD5A6NK44 160 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 SAC3D1A6NKF1 404 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 SDR42E2A6NKP2 422 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 C17orf51A8MQB3 221 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 MIF4GDA9UHW6 222 aaKnown RBP3.57□□□□□ -1.84
SSR3-204ENST00000467733 SAP18O00422 153 aaKnown RBP3.57□□□□□ -1.84
SSR3-204ENST00000467733 PLPP1O14494 284 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 CLGNO14967 610 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TO15178 435 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TSPAN2O60636 221 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 SH3BGRLO75368 114 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 SYNGR4O95473 234 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 ADAP00813 363 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TPM3P06753 285 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 NGFRP08138 427 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TPM1P09493 284 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 CCDC175P0C221 793 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 ZSCAN5DPP0CG00 497 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 ZNF17P17021 662 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TNFRSF1BP20333 461 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 COX5AP20674 150 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 S1PR1P21453 382 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 PTAFRP25105 342 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 GIFP27352 417 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TYK2P29597 1187 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 IL2RGP31785 369 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 CASP2P42575 452 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 MAGEA6P43360 314 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 PPICP45877 212 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 ENTPD1P49961 510 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 RAP1GDS1P52306 607 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 ARFIP1P53367 373 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 PRKAA2P54646 552 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 P2RX3P56373 397 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 UBA52P62987 128 aaKnown RBP3.57□□□□□ -1.84
SSR3-204ENST00000467733 ITGADQ13349 1161 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 EFR3AQ14156 821 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 STK11Q15831 433 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 CARTPTQ16568 116 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TMEM44Q2T9K0 475 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 C18orf21Q32NC0 220 aaPredicted RBP3.57□□□□□ -1.84
SSR3-204ENST00000467733 GLYR1Q49A26 553 aaPredicted RBP3.57□□□□□ -1.84
SSR3-204ENST00000467733 HSP90AA5PQ58FG0 334 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 PAGE2BQ5JRK9 111 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 TIMM23BQ5SRD1 257 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 KHDRBS2Q5VWX1 349 aaKnown RBP3.57□□□□□ -1.84
SSR3-204ENST00000467733 TMEM268Q5VZI3 342 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 OR4C11Q6IEV9 310 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 OR52E8Q6IFG1 317 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 MFSD12Q6NUT3 480 aa3.57□□□□□ -1.84
SSR3-204ENST00000467733 SHQ1Q6PI26 577 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms