RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZNF620Q6ZNG0 422 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 SLC26A11Q86WA9 606 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 CLEC4FQ8N1N0 589 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 NPBQ8NG41 125 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 ZNF596Q8TC21 504 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 GIMAP1Q8WWP7 306 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 CMTM7Q96FZ5 175 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 PAGE5Q96GU1 130 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 SH3YL1Q96HL8 342 aaPredicted RBP2.39□□□□□ -2.03
SMC4-207ENST00000467263 SEC22AQ96IW7 307 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 FOPNLQ96NB1 174 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 CTRCQ99895 268 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 NIPSNAP3BQ9BS92 247 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 TPK1Q9H3S4 243 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 COQ10BQ9H8M1 238 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 ELOVL3Q9HB03 270 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 DMAP1Q9NPF5 467 aaPredicted RBP2.39□□□□□ -2.03
SMC4-207ENST00000467263 HOXC10Q9NYD6 342 aa2.39□□□□□ -2.03
SMC4-207ENST00000467263 NSG1A0A0A6YYJ2 146 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 LRP5LA4QPB2 252 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 TAPBPO15533 448 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 UGT1A9O60656 530 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 FOXH1O75593 365 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 UQCRC2P22695 453 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 GLP1RP43220 463 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 PKNOX1P55347 436 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 DEFB116Q30KQ4 102 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 PARP15Q460N3 678 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 OR2G6Q5TZ20 316 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 GPR157Q5UAW9 335 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 FRMPD2BQ6IN97 320 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 OR10T2Q8NGX3 314 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 SLC22A8Q8TCC7 542 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 ZNF721Q8TF20 911 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 STARD8Q92502 1023 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 PELI1Q96FA3 418 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 AMDHD1Q96NU7 426 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 CDC42EP4Q9H3Q1 356 aaKnown RBP2.38□□□□□ -2.03
SMC4-207ENST00000467263 CLMPQ9H6B4 373 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 SIAEQ9HAT2 523 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 CHRNA9Q9UGM1 479 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 OR10H1Q9Y4A9 318 aa2.38□□□□□ -2.03
SMC4-207ENST00000467263 SLIT3O75094 1523 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 KDRP35968 1356 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 RGSL1A5PLK6 1076 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 RBMY1BA6NDE4 496 aaKnown RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 RBMY1EA6NEQ0 496 aaKnown RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 A8MUI8 341 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 PFKFB2O60825 505 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 N4BP1O75113 896 aaKnown RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 BCAS1O75363 584 aaPredicted RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 SPAG7O75391 227 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 MFN2O95140 757 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 KLK3P07288 261 aaPredicted RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 RBMY1DP0C7P1 496 aaKnown RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 RBMY1A1P0DJD3 496 aaKnown RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 PAX7P23759 505 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 MMP11P24347 488 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 CA8P35219 290 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 TDO2P48775 406 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 ARRB1P49407 418 aaPredicted RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 REG3AQ06141 175 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 SHHQ15465 462 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 SAMD4BQ5PRF9 694 aaKnown RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 PYHIN1Q6K0P9 492 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 ABHD12BQ7Z5M8 362 aaPredicted RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 OR1F12Q8NHA8 337 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 DTX3LQ8TDB6 740 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 C7orf34Q96L11 122 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 MRPL45Q9BRJ2 306 aaKnown RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 RTBDNQ9BSG5 229 aaPredicted RBP2.37□□□□□ -2.03
SMC4-207ENST00000467263 ACTR6Q9GZN1 396 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 QPCTLQ9NXS2 382 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 TAS2R3Q9NYW6 316 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 COPS3Q9UNS2 423 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 AURKCQ9UQB9 309 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 HEBP2Q9Y5Z4 205 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 SLC25A15Q9Y619 301 aa2.37□□□□□ -2.03
SMC4-207ENST00000467263 RGS16O15492 202 aaPredicted RBP2.36□□□□□ -2.03
SMC4-207ENST00000467263 AIREO43918 545 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 SS18L1O75177 396 aaPredicted RBP2.36□□□□□ -2.03
SMC4-207ENST00000467263 IFNB1P01574 187 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 EPB41P11171 864 aaKnown RBP2.36□□□□□ -2.03
SMC4-207ENST00000467263 TDGF1P13385 188 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 ABOP16442 354 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 GCAP28676 217 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 MDH1P40925 334 aaKnown RBP2.36□□□□□ -2.03
SMC4-207ENST00000467263 GPM6AP51674 278 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 TDGF1P3P51864 188 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 ZNF136P52737 540 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 HTD2P86397 168 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 SELPLGQ14242 412 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 KIAA0087Q14695 138 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 SLC15A2Q16348 729 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 CDC37Q16543 378 aaPredicted RBP2.36□□□□□ -2.03
SMC4-207ENST00000467263 LINC00483Q53H64 154 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 LRRC10Q5BKY1 277 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 MARCH8Q5T0T0 291 aa2.36□□□□□ -2.03
SMC4-207ENST00000467263 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms