RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 DNALI1O14645 258 aaPredicted RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 CT62P0C5K7 136 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 UBTFL1P0CB47 393 aaPredicted RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 PPIAL4FP0DN26 164 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 ABOP16442 354 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 TNNI1P19237 187 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 KLK2P20151 261 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 CXCR2P25025 360 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 FDFT1P37268 417 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 KLK7P49862 253 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 PLP1P60201 277 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 OR5I1Q13606 314 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 ARL6IP1Q15041 203 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 LRRC36Q1X8D7 754 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 METTL11BQ5VVY1 283 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 PAMR1Q6UXH9 720 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 NIPA1Q7RTP0 329 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 C17orf82Q86X59 251 aaPredicted RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 MARCH9Q86YJ5 346 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 PSTKQ8IV42 348 aaKnown RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 CEND1Q8N111 149 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 LYG1Q8N1E2 194 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 GPR137CQ8N3F9 429 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 ZNF740Q8NDX6 193 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 CCDC148Q8NFR7 591 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 SETD7Q8WTS6 366 aaKnown RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 CHCHD10Q8WYQ3 142 aaPredicted RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 NEIL2Q969S2 332 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 ANKRD9Q96BM1 317 aaPredicted RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 RPUSD4Q96CM3 377 aaKnown RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 PAGE5Q96GU1 130 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 FOXN4Q96NZ1 517 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 MS4A4EQ96PG1 132 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 CNN2Q99439 309 aaKnown RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 TSG101Q99816 390 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 CENPKQ9BS16 269 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 ISG20L2Q9H9L3 353 aaKnown RBP3.05□□□□□ -1.92
VPS13A-209ENST00000467124 NT5MQ9NPB1 228 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 NUDT15Q9NV35 164 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 MMP17Q9ULZ9 603 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 VSIG4Q9Y279 399 aa3.05□□□□□ -1.92
VPS13A-209ENST00000467124 KANK1Q14678 1352 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 IGLV3-22A0A075B6J6 115 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 A0A0U1RQS6 177 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 SMCO2A6NFE2 343 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 OR5B21A6NL26 309 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 PSTPIP1O43586 416 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 OR7A10O76100 309 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 C1orf105O95561 183 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 SERPIND1P05546 499 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 GCFC2P16383 781 aaKnown RBP3.04□□□□□ -1.92
VPS13A-209ENST00000467124 DDOSTP39656 456 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 GYG1P46976 350 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 MEOX2P50222 304 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 SLC26A2P50443 739 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 P2RY4P51582 365 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 SELENOTP62341 195 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 CSNK1G2P78368 415 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 BST2Q10589 180 aaKnown RBP3.04□□□□□ -1.92
VPS13A-209ENST00000467124 PRR4Q16378 134 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 MRPL23Q16540 153 aaKnown RBP3.04□□□□□ -1.92
VPS13A-209ENST00000467124 MICBQ29980 383 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 TMEM107Q6UX40 140 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 UNQ9370/PRO34162Q6UXP9 181 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 BAIAP2L2Q6UXY1 529 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 VRK2Q86Y07 508 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 CDC20BQ86Y33 519 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 APOBEC3FQ8IUX4 373 aaKnown RBP3.04□□□□□ -1.92
VPS13A-209ENST00000467124 NUDCD3Q8IVD9 361 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 PRR22Q8IZ63 422 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 SLC39A11Q8N1S5 342 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 ZNF525Q8N782 197 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 TPRX1Q8N7U7 411 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 OR4F6Q8NGB9 312 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 MRAPQ8TCY5 172 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 FGGYQ96C11 551 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 TM4SF19Q96DZ7 209 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 SEC22AQ96IW7 307 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 PAXXQ9BUH6 204 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 NARFLQ9H6Q4 476 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 SUDS3Q9H7L9 328 aaPredicted RBP3.04□□□□□ -1.92
VPS13A-209ENST00000467124 FOLH1BQ9HBA9 442 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 PSMC3IPQ9P2W1 217 aaPredicted RBP3.04□□□□□ -1.92
VPS13A-209ENST00000467124 B4GALT7Q9UBV7 327 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 IKZF2Q9UKS7 526 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 UGT2A1Q9Y4X1 527 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 PEX16Q9Y5Y5 336 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 V9GY05 133 aa3.04□□□□□ -1.92
VPS13A-209ENST00000467124 A0A0G2JLM5 398 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 SERTM2A0A1B0GWG4 89 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 A0A1W2PPE3 182 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 TEX46H3BTG2 121 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 EIF3HO15372 352 aaKnown RBP eCLIP3.03□□□□□ -1.92
VPS13A-209ENST00000467124 BCL2L11O43521 198 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 WBP4O75554 376 aaKnown RBP3.03□□□□□ -1.92
VPS13A-209ENST00000467124 TMEM50AO95807 157 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 NDUFB10O96000 172 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 KLK3P07288 261 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-209ENST00000467124 KITLGP21583 273 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 SLC2A5P22732 501 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms