RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 EXOSC7Q15024 291 aaKnown RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 DEFB133Q30KQ1 61 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 HNRNPA1L2Q32P51 320 aaKnown RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 C14orf28Q4W4Y0 310 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 C1orf189Q5VU69 101 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 NKAIN2Q5VXU1 208 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 RTL6Q6ICC9 239 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 GUSBP11Q6P575 273 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 ABRAXAS1Q6UWZ7 409 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 DLEU7Q6UYE1 221 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 Q6ZRG5 221 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 PAQR9Q6ZVX9 377 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 ZNF525Q8N782 197 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 ARL10Q8N8L6 244 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 C12orf29Q8N999 325 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 CHDHQ8NE62 594 aaPredicted RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 TMEM185AQ8NFB2 350 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 SLC2A14Q8TDB8 520 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 KLK6Q92876 244 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 PNPLA2Q96AD5 504 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 CCDC127Q96BQ5 260 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 TMA16Q96EY4 203 aaKnown RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 ACCSQ96QU6 501 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 CBWD1Q9BRT8 395 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 SMYD3Q9H7B4 428 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 CSNK1G1Q9HCP0 422 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 ZNF275Q9NSD4 429 aaPredicted RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 ABCC13Q9NSE7 274 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 FAM49BQ9NUQ9 324 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 IL37Q9NZH6 218 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 NDUFA13Q9P0J0 144 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 RCOR3Q9P2K3 495 aaPredicted RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 CYTH4Q9UIA0 394 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 MOSPD1Q9UJG1 213 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 GGA2Q9UJY4 613 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 DIMT1Q9UNQ2 313 aaKnown RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 SCML2Q9UQR0 700 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 CA5BQ9Y2D0 317 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 STRAPQ9Y3F4 350 aaKnown RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 RP1P56715 2156 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 SDK2Q58EX2 2172 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 USP9XQ93008 2570 aaPredicted RBP2.4□□□□□ -2.03
XRN1-206ENST00000467077 UBE4BO95155 1302 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 PTPN13Q12923 2485 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 KNTC1P50748 2209 aa2.4□□□□□ -2.03
XRN1-206ENST00000467077 TRPM6Q9BX84 2022 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 PDZD2O15018 2839 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 ITPR2Q14571 2701 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 E7ENQ6 273 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 TMX2-CTNND1H3BSU7 103 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 EEF2KO00418 725 aaKnown RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 SAP18O00422 153 aaKnown RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 CHEK1O14757 476 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 NVLO15381 856 aaKnown RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 AQP9O43315 295 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 NME2P1O60361 137 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 TBL1XO60907 577 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 HSD17B1P14061 328 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 STMN1P16949 149 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 PPP2R1BP30154 601 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 UGT1A5P35504 534 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 NUDT1P36639 197 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 CSKP41240 450 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 ACADSBP45954 432 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 UQCRFS1P47985 274 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 NUMBP49757 651 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 HNRNPFP52597 415 aaKnown RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 METAP1P53582 386 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 YWHAGP61981 247 aaKnown RBP eCLIP2.39□□□□□ -2.03
XRN1-206ENST00000467077 CCZ1BP86790 482 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 CCZ1P86791 482 aaPredicted RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 EIF3IQ13347 325 aaKnown RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 ELAVL3Q14576 367 aaKnown RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 SNRNP35Q16560 246 aaKnown RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 ANKRD55Q3KP44 614 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 GPAT3Q53EU6 434 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 C9orf64Q5T6V5 341 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 HIST2H2AA3Q6FI13 130 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 OR6B2Q6IFH4 312 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 SCARA5Q6ZMJ2 495 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 Q6ZSR6 202 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 CLEC20AQ6ZU45 233 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 SCD5Q86SK9 330 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 ADAMTSL2Q86TH1 951 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 TRIM69Q86WT6 500 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 CBWD2Q8IUF1 395 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 STK40Q8N2I9 435 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 FAM184AQ8NB25 1140 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 CCNYQ8ND76 341 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 ICA1LQ8NDH6 482 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 OR52E1Q8NGJ3 308 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 WFDC5Q8TCV5 224 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 LMX1AQ8TE12 382 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 HTR3CQ8WXA8 447 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 SYAP1Q96A49 352 aaPredicted RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 ZNF799Q96GE5 643 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 C16orf58Q96GQ5 468 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 RUFY1Q96T51 708 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 SPAG8Q99932 426 aaPredicted RBP2.39□□□□□ -2.03
XRN1-206ENST00000467077 DDX47Q9H0S4 455 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms