RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZNF611Q8N823 705 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 OR9K2Q8NGE7 335 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 PERPQ96FX8 193 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 ZNF385AQ96PM9 386 aaKnown RBP19.18■□□□□ 0.66
LIME1-203ENST00000465591 USB1Q9BQ65 265 aaKnown RBP19.18■□□□□ 0.66
LIME1-203ENST00000465591 PTDSS2Q9BVG9 487 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 SLC7A10Q9NS82 523 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 ADPRHL2Q9NX46 363 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 SLC9A8Q9Y2E8 581 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 NDUFAF1Q9Y375 327 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 EVPLLA8MZ36 301 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 CD3EP07766 207 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 RIPPLY3P57055 190 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 MTPNP58546 118 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 TIMM23BQ5SRD1 257 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 TSPO2Q5TGU0 170 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 C9orf135Q5VTT2 229 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 SHEQ5VZ18 495 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 KBTBD8Q8NFY9 601 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 ANKRD27Q96NW4 1050 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 CGREF1Q99674 301 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 TMEM120AQ9BXJ8 343 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 ESRP2Q9H6T0 727 aaKnown RBP19.17■□□□□ 0.66
LIME1-203ENST00000465591 ASB6Q9NWX5 421 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 TRIM33Q9UPN9 1127 aa19.17■□□□□ 0.66
LIME1-203ENST00000465591 A0A1B0GWA3 101 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 A0A1W2PR80 420 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 FTCDNL1E5RQL4 147 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 SLC6A2P23975 617 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 DMTNQ08495 405 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 SF3A3Q12874 501 aaKnown RBP eCLIP19.16■□□□□ 0.66
LIME1-203ENST00000465591 GABRA6Q16445 453 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 CGB2Q6NT52 195 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 ADAM5Q6NVV9 412 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 C6orf89Q6UWU4 347 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 P3H2Q8IVL5 708 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 STK35Q8TDR2 534 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 TMEM45BQ96B21 275 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 KTI12Q96EK9 354 aaPredicted RBP19.16■□□□□ 0.66
LIME1-203ENST00000465591 SIKE1Q9BRV8 207 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 TAPBPLQ9BX59 468 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 NGBQ9NPG2 151 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 TAS2R16Q9NYV7 291 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 SEC14L4Q9UDX3 406 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 CORO2BQ9UQ03 480 aa19.16■□□□□ 0.66
LIME1-203ENST00000465591 IGKV1D-42A0A075B6H8 117 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 CIB4A0PJX0 185 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 CCT8L1PA6NM43 557 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 FBP2O00757 339 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 ANGPT2O15123 496 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 TPST2O60704 377 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 PTH2RP49190 550 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 PCBP3P57721 371 aaKnown RBP19.15■□□□□ 0.66
LIME1-203ENST00000465591 GPAT4Q86UL3 456 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 KRT73Q86Y46 540 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 LSMEM1Q8N8F7 131 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 HIPK4Q8NE63 616 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 OR52N5Q8NH56 324 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 SMR3AQ99954 134 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 SF3B5Q9BWJ5 86 aaKnown RBP19.15■□□□□ 0.66
LIME1-203ENST00000465591 GSX2Q9BZM3 304 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 FGFR1OP2Q9NVK5 253 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 SLC25A15Q9Y619 301 aa19.15■□□□□ 0.66
LIME1-203ENST00000465591 MFN2O95140 757 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 AHSA1O95433 338 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 SOD3P08294 240 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 RPS5P46782 204 aaKnown RBP19.14■□□□□ 0.65
LIME1-203ENST00000465591 LGALS3BPQ08380 585 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 ZNF672Q499Z4 452 aaPredicted RBP19.14■□□□□ 0.65
LIME1-203ENST00000465591 AAED1Q7RTV5 226 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 YTHDF3Q7Z739 585 aaKnown RBP19.14■□□□□ 0.65
LIME1-203ENST00000465591 P2RY8Q86VZ1 359 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 KDM8Q8N371 416 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 MFSD8Q8NHS3 518 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 TSPEARQ8WU66 669 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 SLC25A36Q96CQ1 311 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 MUCL1Q96DR8 90 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 MUS81Q96NY9 551 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 SPATA5L1Q9BVQ7 753 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 TRIM2Q9C040 744 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 AMBRA1Q9C0C7 1298 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 PARPBPQ9NWS1 579 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 LAMP3Q9UQV4 416 aa19.14■□□□□ 0.65
LIME1-203ENST00000465591 TLN2Q9Y4G6 2542 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 ELOA3DA6NLF2 546 aaPredicted RBP19.13■□□□□ 0.65
LIME1-203ENST00000465591 SHISA9B4DS77 424 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 ARHGEF9O43307 516 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 OPN1SWP03999 348 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 DANCRP0C864 163 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 PNMTP11086 282 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 FOSL1P15407 271 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 SLC25A3Q00325 362 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 NFYCQ13952 458 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 ELOA3BQ3SY89 546 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 METTL21CQ5VZV1 264 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 TMEM225Q6GV28 225 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 CREB3L2Q70SY1 520 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 EPHX4Q8IUS5 362 aa19.13■□□□□ 0.65
LIME1-203ENST00000465591 CIARTQ8N365 385 aaPredicted RBP19.13■□□□□ 0.65
LIME1-203ENST00000465591 WDR31Q8NA23 367 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms