RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 IDSB3KWA1 339 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 NPIPA7E9PJI5 369 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 M0R3G1 203 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 MAN1A2O60476 641 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 SEC14L2O76054 403 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 HTR1AP08908 422 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 NPIPA8P0DM63 369 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 ABOP16442 354 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 TBXA2RP21731 343 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 FUT4P22083 530 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 DCKP27707 260 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 HTR2AP28223 471 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 IL12BP29460 328 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 SLC6A8P48029 635 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 GIPRP48546 466 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 GPR143P51810 404 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 TMBIM6P55061 237 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 CTBP2P56545 445 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 HOXC5Q00444 222 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 CDK5Q00535 292 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 OCLNQ16625 522 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 XAF1Q6GPH4 301 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 B3GNT6Q6ZMB0 384 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 NKAIN4Q8IVV8 208 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 NRMQ8IXM6 262 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 BEST3Q8N1M1 668 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 FAM71CQ8NEG0 241 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 OR8K3Q8NH51 312 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 CNOT9Q92600 299 aaKnown RBP12.54□□□□□ -0.4
HDAC6-215ENST00000465457 RORBQ92753 470 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 MUL1Q969V5 352 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 FRMD6Q96NE9 622 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 BCL7BQ9BQE9 202 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 COPS4Q9BT78 406 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 SLC19A3Q9BZV2 496 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 CCDC90BQ9GZT6 254 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 NXF5Q9H1B4 397 aaKnown RBP12.54□□□□□ -0.4
HDAC6-215ENST00000465457 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-215ENST00000465457 MED31Q9Y3C7 131 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 RPL36Q9Y3U8 105 aaKnown RBP12.54□□□□□ -0.4
HDAC6-215ENST00000465457 CDH10Q9Y6N8 788 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 TLN2Q9Y4G6 2542 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 A0A1W2PQ72 361 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 A8MUA0 341 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF99A8MXY4 864 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-215ENST00000465457 RCBTB2O95199 551 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 UTS2O95399 124 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 SOX14O95416 240 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 IGF2P01344 180 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 TP53P04637 393 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-215ENST00000465457 UBL4AP11441 157 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 PRG2P13727 222 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ACAA2P42765 397 aaKnown RBP12.53□□□□□ -0.4
HDAC6-215ENST00000465457 PCYT1AP49585 367 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 PNLIPRP2P54317 469 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 EMP2P54851 167 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 NRG3P56975 720 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 PRKCDQ05655 676 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 PMS2P3Q13401 168 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 GINS1Q14691 196 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 TBCEQ15813 527 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-215ENST00000465457 NNATQ16517 81 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 RNFT1Q5M7Z0 435 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ABHD17BQ5VST6 288 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF620Q6ZNG0 422 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 TMPRSS11FQ6ZWK6 438 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 AHSA2Q719I0 299 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ANKRD37Q7Z713 158 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 C9orf40Q8IXQ3 194 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 RPRMLQ8N4K4 120 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 MDS2Q8NDY4 140 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 NUBPLQ8TB37 319 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 TMEM255BQ8WV15 326 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 VMP1Q96GC9 406 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 FAM46AQ96IP4 442 aaKnown RBP12.53□□□□□ -0.4
HDAC6-215ENST00000465457 SIGLEC11Q96RL6 698 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 GAL3ST4Q96RP7 486 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 PRSS27Q9BQR3 290 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF426Q9BUY5 554 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 YIPF3Q9GZM5 350 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 HHATLQ9HCP6 504 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 TBC1D23Q9NUY8 699 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 ERVK-18Q9QC07 812 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
HDAC6-215ENST00000465457 IGHV3-20A0A0C4DH32 117 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 UNC119BA6NIH7 251 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 E9PLN8 166 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 PPM1BO75688 479 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 LYPD3O95274 346 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 THY1P04216 161 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 HMGN1P05114 100 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 CDK1P06493 297 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 GKN3PP0CG01 181 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 PNMTP11086 282 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms