RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNF304Q9HCX3 659 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-207ENST00000463477 FBXO34Q9NWN3 711 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 GPN3Q9UHW5 284 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-207ENST00000463477 TBC1D24Q9ULP9 559 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 SLC35A3Q9Y2D2 325 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 FER1L5A0AVI2 2057 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 GXYLT2A0PJZ3 443 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 SGK494L7N484 410 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 RGS5O15539 181 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 FOXS1O43638 330 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 RDH16O75452 317 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 NSA2O95478 260 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 CH25HO95992 272 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 LALBAP00709 142 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 SFTPCP11686 197 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 PAICSP22234 425 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 SDC2P34741 201 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 ACAA2P42765 397 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 OR1D4P47884 311 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 EMDP50402 254 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 HNRNPA0Q13151 305 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 ASAH1Q13510 395 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 FGFBP1Q14512 234 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 EXOSC7Q15024 291 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 DEFB109BQ30KR1 87 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 ATP1A1-AS1Q5TC04 95 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 DESI1Q6ICB0 168 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF550Q7Z398 422 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 LHFPL3Q86UP9 236 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 EGFL6Q8IUX8 553 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 LAX1Q8IWV1 398 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 EXD3Q8N9H8 876 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 OR52R1Q8NGF1 315 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 OR2Y1Q8NGV0 311 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 HTRA1Q92743 480 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 VSTM2LQ96N03 204 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 SECISBP2Q96T21 854 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 SOSTQ9BQB4 213 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 PELOQ9BRX2 385 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 WDR54Q9H977 334 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
PTPRD-207ENST00000463477 KCNMB2Q9Y691 235 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 SPTA1P02549 2419 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 HEATR5AQ86XA9 2040 aa9.05□□□□□ -0.96
PTPRD-207ENST00000463477 TLN1Q9Y490 2541 aaKnown RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 IGLV3-12A0A075B6K2 115 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 A0A1W2PQL4 384 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 CDC14CA4D256 554 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 VSTM2BA6NLU5 285 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 GABRPO00591 440 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SOCS6O14544 535 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 OR10H2O60403 315 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 PRAMEF2O60811 474 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 IGF2P01344 180 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 HLA-DQB1P01920 261 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 GKN3PP0CG01 181 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 IL7P13232 177 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SLC2A5P22732 501 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 CD79BP40259 229 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 EIF2B2P49770 351 aaKnown RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SCN1BQ07699 218 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 POU4F2Q12837 409 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 IL10RAQ13651 578 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 GALEQ14376 348 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 VASNQ6EMK4 673 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 MED25Q71SY5 747 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 COX15Q7KZN9 410 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 GPALPP1Q8IXQ4 340 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SIRT6Q8N6T7 355 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 BBS1Q8NFJ9 593 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 IL17RDQ8NFM7 739 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 OR9A4Q8NGU2 314 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 PFN4Q8NHR9 129 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SPRYD4Q8WW59 207 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 HPS1Q92902 700 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 KISS1RQ969F8 398 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 IP6K3Q96PC2 410 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 G6PC3Q9BUM1 346 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 KCNN2Q9H2S1 579 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ABCB9Q9NP78 766 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 MEPEQ9NQ76 525 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 C20orf141Q9NUB4 165 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 DNAJB12Q9NXW2 375 aaKnown RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 TUBD1Q9UJT1 453 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 NXT1Q9UKK6 140 aaKnown RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ITGB1BP2Q9UKP3 347 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 YARS2Q9Y2Z4 477 aaKnown RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 PTRH2Q9Y3E5 179 aaKnown RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 KALRNO60229 2985 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 COL6A6A6NMZ7 2263 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 A0A1B0GWA3 101 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 CCDC182A6NF36 153 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 RIIAD1A6NNX1 92 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 PRR23D1E9PI22 279 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 H0YIG0 161 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 APOL3O95236 402 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SLC2A10O95528 541 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms