RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PATL1Q86TB9 770 aaKnown RBP14.35□□□□□ -0.11
COL1A1-202ENST00000463440 COMTD1Q86VU5 262 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 RANBP3LQ86VV4 465 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-202ENST00000463440 LSRQ86X29 649 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-202ENST00000463440 OR10A6Q8NH74 314 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 MFSD8Q8NHS3 518 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 LRRC58Q96CX6 371 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 PLPPR2Q96GM1 343 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 RSPO3Q9BXY4 272 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-202ENST00000463440 PIF1Q9H611 641 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 NANOGQ9H9S0 305 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 TMEM27Q9HBJ8 222 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 ASB6Q9NWX5 421 aa14.35□□□□□ -0.11
COL1A1-202ENST00000463440 F8P00451 2351 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 M0QX08 132 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 MRASO14807 208 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 VAMP5O95183 116 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 GGT1P19440 569 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 HTR2AP28223 471 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 GTF2E2P29084 291 aaKnown RBP14.34□□□□□ -0.11
COL1A1-202ENST00000463440 NTF4P34130 210 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 PCGF2P35227 344 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 DMTNQ08495 405 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 STK11Q15831 433 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 ALG10BQ5I7T1 473 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 FAM91A1Q658Y4 838 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 REP15Q6BDI9 236 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 ULK3Q6PHR2 472 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 ZNF704Q6ZNC4 412 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-202ENST00000463440 C20orf204Q6ZNR8 217 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 GPAT4Q86UL3 456 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 P2RY8Q86VZ1 359 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 ZNF433Q8N7K0 673 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-202ENST00000463440 SMYD1Q8NB12 490 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 PCYOX1LQ8NBM8 494 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 OR9K2Q8NGE7 335 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 OR8J3Q8NGG0 315 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 TMEM45BQ96B21 275 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 MUCL1Q96DR8 90 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 SLC47A1Q96FL8 570 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 BEX4Q9NWD9 120 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-202ENST00000463440 UPB1Q9UBR1 384 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 MALT1Q9UDY8 824 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 CAPN7Q9Y6W3 813 aa14.34□□□□□ -0.11
COL1A1-202ENST00000463440 LOC100653049A0A140TA62 436 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 CIB4A0PJX0 185 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 CCT8L1PA6NM43 557 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 SLC22A2O15244 555 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 OR2T1O43869 369 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 KRT34O76011 436 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 C8BP07358 591 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 RPS5P46782 204 aaKnown RBP14.33□□□□□ -0.12
COL1A1-202ENST00000463440 EGR4Q05215 589 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 FAPQ12884 760 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 PPA1Q15181 289 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 OR1Q1Q15612 314 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 TIMM23BQ5SRD1 257 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 SNX32Q86XE0 403 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 SLC26A7Q8TE54 656 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 C10orf82Q8WW14 230 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 SLC38A4Q969I6 547 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 PIGTQ969N2 578 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 SLC25A36Q96CQ1 311 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF317Q96PQ6 595 aaPredicted RBP14.33□□□□□ -0.12
COL1A1-202ENST00000463440 ECSITQ9BQ95 431 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 ESRP2Q9H6T0 727 aaKnown RBP14.33□□□□□ -0.12
COL1A1-202ENST00000463440 GID8Q9NWU2 228 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 TAS2R16Q9NYV7 291 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 RASD1Q9Y272 281 aa14.33□□□□□ -0.12
COL1A1-202ENST00000463440 PRRC2AP48634 2157 aaKnown RBP14.33□□□□□ -0.12
COL1A1-202ENST00000463440 FTCDNL1E5RQL4 147 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 LGI1O95970 557 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 OPN1SWP03999 348 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 DUSP7Q16829 419 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 VMACQ2NL98 169 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 RABL3Q5HYI8 236 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 FAM69AQ5T7M9 428 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 OR7E24Q6IFN5 339 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 AAED1Q7RTV5 226 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 RASSF5Q8WWW0 418 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 KTI12Q96EK9 354 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-202ENST00000463440 CCL19Q99731 98 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 PIP5K1AQ99755 562 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 TMEM204Q9BSN7 226 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 PTDSS2Q9BVG9 487 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 PRR14LQ5THK1 2151 aa14.32□□□□□ -0.12
COL1A1-202ENST00000463440 CELSR1Q9NYQ6 3014 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 TRAV36DV7A0A075B6V5 113 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 A0A087WUJ7 227 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 A0A0B4J2E0 115 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 A0A1B0GX12 115 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 OR5H1A6NKK0 313 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 M0R3H8 397 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 FXYD1O00168 92 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 FMO6PO60774 539 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 CCDC22O60826 627 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 RAD51DO75771 328 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 CD3EP07766 207 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms