RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 DNAJA3Q96EY1 480 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 TEX37Q96LM6 180 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 NAA11Q9BSU3 229 aaPredicted RBP17.33■□□□□ 0.36
VARS-221ENST00000463184 TMEM120AQ9BXJ8 343 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 SLC17A5Q9NRA2 495 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 FLVCR1Q9Y5Y0 555 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 ZNF16P17020 682 aaPredicted RBP17.32■□□□□ 0.36
VARS-221ENST00000463184 IL12AP29459 219 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 S100A3P33764 101 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 IDH2P48735 452 aaKnown RBP17.32■□□□□ 0.36
VARS-221ENST00000463184 GZMKP49863 264 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 ARFIP2P53365 341 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 PHC1P78364 1004 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 ANXA8L1Q5VT79 327 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 FRRS1Q6ZNA5 592 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 VPS37AQ8NEZ2 397 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 RAB8BQ92930 207 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 DDIT4LQ96D03 193 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 ZG16BQ96DA0 208 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 SLC7A10Q9NS82 523 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 KLHL14Q9P2G3 628 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 TRIM33Q9UPN9 1127 aa17.32■□□□□ 0.36
VARS-221ENST00000463184 TMED7-TICAM2A0A0A6YYA0 188 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 PRSS51A0A1B0GVH4 220 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 ZNF208O43345 1280 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 SCN2BO60939 215 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 WNT11O96014 354 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 CCNA2P20248 432 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 LSP1P33241 339 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 ATP4BP51164 291 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 MAP2K6P52564 334 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 PRPS1P60891 318 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 GNGT1P63211 74 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 FUT5Q11128 374 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 KRTAP24-1Q3LI83 254 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 FAM174BQ3ZCQ3 159 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 SPANXN4Q5MJ08 99 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 C9orf135Q5VTT2 229 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 METTL21CQ5VZV1 264 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 TNFAIP8L2Q6P589 184 aaPredicted RBP17.31■□□□□ 0.36
VARS-221ENST00000463184 TMED7Q9Y3B3 224 aa17.31■□□□□ 0.36
VARS-221ENST00000463184 NDUFS8O00217 210 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 CPSF4O95639 269 aaKnown RBP17.3■□□□□ 0.36
VARS-221ENST00000463184 IL6P05231 212 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 NCF2P19878 526 aaPredicted RBP17.3■□□□□ 0.36
VARS-221ENST00000463184 MPGP29372 298 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 KHKP50053 298 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 PDLIM4P50479 330 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 POLR2HP52434 150 aaKnown RBP17.3■□□□□ 0.36
VARS-221ENST00000463184 HPCAP84074 193 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 SLC17A1Q14916 467 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 SWI5Q1ZZU3 235 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 TSPO2Q5TGU0 170 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 SAXO2Q658L1 398 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 FAM166AQ6J272 317 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 CMIPQ8IY22 773 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 NEURL3Q96EH8 262 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 TMEM45AQ9NWC5 275 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 OSGIN1Q9UJX0 560 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 KCNS2Q9ULS6 477 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 FKBP7Q9Y680 259 aa17.3■□□□□ 0.36
VARS-221ENST00000463184 TMEM72A0PK05 275 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 GMNCA6NCL1 334 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 CLDN24A6NM45 220 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 VWC2LB2RUY7 222 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 PGRP06401 933 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 IMPDH2P12268 514 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 SRD5A1P18405 259 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 POLR2JP52435 117 aaKnown RBP17.29■□□□□ 0.36
VARS-221ENST00000463184 SEC24CP53992 1094 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 SLC25A3Q00325 362 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 PLAURQ03405 335 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 LRRC74AQ0VAA2 488 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 SQLEQ14534 574 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 MST1LQ2TV78 715 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 GPAT3Q53EU6 434 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 PAQR6Q6TCH4 344 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 KLHL24Q6TFL4 600 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 ANKRD46Q86W74 232 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 ARIH2OSQ8N7S6 290 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 TMEM45BQ96B21 275 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 FBXO17Q96EF6 278 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 BOD1Q96IK1 185 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 PIMREGQ9BSJ6 248 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 NSRP1Q9H0G5 558 aaKnown RBP17.29■□□□□ 0.36
VARS-221ENST00000463184 RABEP2Q9H5N1 569 aa17.29■□□□□ 0.36
VARS-221ENST00000463184 ATP6V1G2-DDX39BF2Z307 99 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 LY6HO94772 140 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 PAX7P23759 505 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 IGFBP5P24593 272 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 SLC1A3P43003 542 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 SF3A3Q12874 501 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■■■□ 22.9
VARS-221ENST00000463184 HMGN2P46Q86SG4 172 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 POMGNT2Q8NAT1 580 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 OR9I1Q8NGQ6 314 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 CNOT9Q92600 299 aaKnown RBP17.28■□□□□ 0.36
VARS-221ENST00000463184 OR52E6Q96RD3 313 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 SF3B5Q9BWJ5 86 aaKnown RBP17.28■□□□□ 0.36
VARS-221ENST00000463184 PIF1Q9H611 641 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 OBP2BQ9NPH6 170 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms