RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 HIPK1Q86Z02 1210 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 TUSC5Q8IXB3 177 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 ATP6V1C2Q8NEY4 427 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 STEAP2Q8NFT2 490 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 SMAP2Q8WU79 429 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 ROBO4Q8WZ75 1007 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 OSTF1Q92882 214 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 TACO1Q9BSH4 297 aaKnown RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 TRAF4Q9BUZ4 470 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 SPATA9Q9BWV2 254 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 TRIM2Q9C040 744 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 ADAM19Q9H013 955 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 ARMCX1Q9P291 453 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 STOML1Q9UBI4 398 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 OSGIN1Q9UJX0 560 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 GDF2Q9UK05 429 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 NDUFAF1Q9Y375 327 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 IGHV3-15A0A0B4J1V0 119 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMEM72A0PK05 275 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZC3H12DA2A288 527 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 DPRXA6NFQ7 191 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 CFAP73A6NFT4 308 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SHISA9B4DS77 424 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF814B7Z6K7 855 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ANGPT2O15123 496 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SMAD9O15198 467 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 RAMP1O60894 148 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ETS2P15036 469 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 DRD4P21917 467 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 IDUAP35475 653 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 APOBEC1P41238 236 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 CRYBA2P53672 197 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SEC24CP53992 1094 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 GYS2P54840 703 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 CARD18P57730 90 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 RAC3P60763 192 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 FAPQ12884 760 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 NFYCQ13952 458 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SCARB2Q14108 478 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 GNA13Q14344 377 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 COQ5Q5HYK3 327 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF311Q5JNZ3 666 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ALKBH2Q6NS38 261 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 REEP3Q6NUK4 255 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 DHRS4L2Q6PKH6 230 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SERPINA11Q86U17 422 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 DTX2Q86UW9 622 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SNX32Q86XE0 403 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 CALHM3Q86XJ0 350 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF440Q8IYI8 595 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF563Q8TA94 476 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SLC25A43Q8WUT9 341 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMEM234Q8WY98 164 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 SLC35B4Q969S0 331 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 CPNE4Q96A23 557 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 C3orf49Q96BT1 292 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 DNAJA3Q96EY1 480 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 TRMT61AQ96FX7 289 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 ARL5BQ96KC2 179 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR5B2Q96R09 309 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 WFDC6Q9BQY6 131 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 POTEKPQ9BYX7 375 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR11A1Q9GZK7 315 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 KAT8Q9H7Z6 458 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 FANCFQ9NPI8 374 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 NPAP1Q9NZP6 1156 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 CHRNA9Q9UGM1 479 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 CORO2BQ9UQ03 480 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 IFT52Q9Y366 437 aa6.99□□□□□ -1.29
CDC42BPA-210ENST00000462553 IGHV4-30-2A0A087WSY4 118 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMED7-TICAM2A0A0A6YYA0 188 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMEM247A6NEH6 219 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 GJE1A6NN92 205 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 BBIP1A8MTZ0 92 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 EVPLLA8MZ36 301 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMEM229AB2RXF0 380 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 MRASO14807 208 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 GPRIN2O60269 458 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TPST1O60507 370 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 MFN2O95140 757 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 ADAP00813 363 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 FESP07332 822 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 IMPDH2P12268 514 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 COX5AP20674 150 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 ENPP1P22413 925 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 IL32P24001 234 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 HTR2AP28223 471 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TACR3P29371 465 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 AQP1P29972 269 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 SLC7A1P30825 629 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 PRKAR1BP31321 381 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 LSP1P33241 339 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 SLC1A3P43003 542 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR3A2P47893 321 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 DIO1P49895 249 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 POLR2HP52434 150 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 HOXC5Q00444 222 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 LARS2Q15031 903 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 RNPS1Q15287 305 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms