RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 AQP5P55064 265 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 RAB35Q15286 201 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 RGNQ15493 299 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 GCNT6Q5T4J0 391 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 C1QTNF12Q5T7M4 302 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 C9orf135Q5VTT2 229 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 HMBOX1Q6NT76 420 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 SLC2A7Q6PXP3 512 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 EPGNQ6UW88 154 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 C5orf46Q6UWT4 87 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 ZNF836Q6ZNA1 936 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 C22orf34Q6ZV56 151 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 CPLX4Q7Z7G2 160 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 C17orf78Q8N4C9 275 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 ZNF433Q8N7K0 673 aaPredicted RBP7.83□□□□□ -1.16
LDB1-203ENST00000461873 C1orf162Q8NEQ5 155 aaPredicted RBP7.83□□□□□ -1.16
LDB1-203ENST00000461873 KBTBD8Q8NFY9 601 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 SLC26A7Q8TE54 656 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 SPDL1Q96EA4 605 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 ZNF317Q96PQ6 595 aaPredicted RBP7.83□□□□□ -1.16
LDB1-203ENST00000461873 OR52B2Q96RD2 323 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 ELAC2Q9BQ52 826 aaKnown RBP7.83□□□□□ -1.16
LDB1-203ENST00000461873 RHNO1Q9BSD3 238 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 TMEM204Q9BSN7 226 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 CCDC28BQ9BUN5 200 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 TMEM27Q9HBJ8 222 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 MOV10Q9HCE1 1003 aaKnown RBP7.83□□□□□ -1.16
LDB1-203ENST00000461873 DLL4Q9NR61 685 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 TMEM45AQ9NWC5 275 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 DCTN4Q9UJW0 460 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 RASD1Q9Y272 281 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 PCDHB14Q9Y5E9 798 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 PMF1-BGLAPU3KQ54 211 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
LDB1-203ENST00000461873 HEATR1Q9H583 2144 aaKnown RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 A0A1W2PR80 420 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 PRAMEF27A3QJZ7 478 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 DPRXA6NFQ7 191 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 TRIM64A6NGJ6 449 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 TRIM64BA6NI03 449 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 SHOX2O60902 331 aaPredicted RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 PGM3O95394 542 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 PNMTP11086 282 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 NQO1P15559 274 aaKnown RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 PAX1P15863 534 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 COX5AP20674 150 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 RPS4Y1P22090 263 aaKnown RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 PCSK6P29122 969 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 MPGP29372 298 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 CDKN1AP38936 164 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 NUDT6P53370 316 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 SQLEQ14534 574 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 AGKQ53H12 422 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 RPS26P11Q5JNZ5 115 aaPredicted RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 C1orf140Q5VVS0 124 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 AP1ARQ63HQ0 302 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 CGB2Q6NT52 195 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 REEP3Q6NUK4 255 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 NIPAL3Q6P499 406 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 RANBP3LQ86VV4 465 aaPredicted RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 C10orf53Q8N6V4 93 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 TMEM99Q8N816 258 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 OR9K2Q8NGE7 335 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 OR52E4Q8NGH9 312 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 OR9I1Q8NGQ6 314 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 STK35Q8TDR2 534 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 DNAJA4Q8WW22 397 aaPredicted RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 SLC38A4Q969I6 547 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 SLC35B4Q969S0 331 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 AURKBQ96GD4 344 aaPredicted RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 POM121Q96HA1 1249 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 COX4I2Q96KJ9 171 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 CCT8L2Q96SF2 557 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 EPYCQ99645 322 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 SMR3AQ99954 134 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 C1QTNF6Q9BXI9 259 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 TRIM2Q9C040 744 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 ADAM19Q9H013 955 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 SLCO5A1Q9H2Y9 848 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 PIF1Q9H611 641 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 CCDC134Q9H6E4 229 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 A4GALTQ9NPC4 353 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 MRGBPQ9NV56 204 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 ZNF701Q9NV72 531 aaPredicted RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 MALT1Q9UDY8 824 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 ANGPT4Q9Y264 503 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 FLVCR1Q9Y5Y0 555 aa7.82□□□□□ -1.16
LDB1-203ENST00000461873 MAP1AP78559 2803 aaPredicted RBP7.82□□□□□ -1.16
LDB1-203ENST00000461873 LIPT2A6NK58 231 aa7.81□□□□□ -1.16
LDB1-203ENST00000461873 AQP7P3A6NL99 342 aa7.81□□□□□ -1.16
LDB1-203ENST00000461873 ZNF716A6NP11 495 aa7.81□□□□□ -1.16
LDB1-203ENST00000461873 EDF1O60869 148 aaKnown RBP7.81□□□□□ -1.16
LDB1-203ENST00000461873 BCAS1O75363 584 aaPredicted RBP7.81□□□□□ -1.16
LDB1-203ENST00000461873 OR6A2O95222 327 aa7.81□□□□□ -1.16
LDB1-203ENST00000461873 LY6G6DO95868 133 aa7.81□□□□□ -1.16
LDB1-203ENST00000461873 ERCC1P07992 297 aaPredicted RBP7.81□□□□□ -1.16
LDB1-203ENST00000461873 IMPDH2P12268 514 aa7.81□□□□□ -1.16
LDB1-203ENST00000461873 ETS2P15036 469 aa7.81□□□□□ -1.16
LDB1-203ENST00000461873 CD40P25942 277 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms