RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 A4GALTQ9NPC4 353 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 SLC52A3Q9NQ40 469 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 CISD1Q9NZ45 108 aaKnown RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 DCTN4Q9UJW0 460 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 MGAT4BQ9UQ53 548 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ZNF443Q9Y2A4 671 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 SLC9A8Q9Y2E8 581 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 PCDHB14Q9Y5E9 798 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 NSD1Q96L73 2696 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 FN1P02751 2386 aaKnown RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 CIB4A0PJX0 185 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM247A6NEH6 219 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 AQP7P3A6NL99 342 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 CLIC1O00299 241 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 FZD7O75084 574 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 CD8AP01732 235 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 IGHV3-9P01782 118 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 BCHEP06276 602 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 GPIP06744 558 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 ITGA5P08648 1049 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 GKN3PP0CG01 181 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 PRG2P13727 222 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 ETS2P15036 469 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 IDUAP35475 653 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 IDH3AP50213 366 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 P2RY4P51582 365 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 FOXG1P55316 489 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-207ENST00000461798 COPZ1P61923 177 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 FAPQ12884 760 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 CEACAM7Q14002 265 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 STK11Q15831 433 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 C6orf10Q5SRN2 563 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 TSPO2Q5TGU0 170 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM108Q6UXF1 575 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 Q71RC1 249 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-207ENST00000461798 UBE2J2Q8N2K1 259 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 C17orf78Q8N4C9 275 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM99Q8N816 258 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 WDR31Q8NA23 367 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 KBTBD8Q8NFY9 601 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 STK35Q8TDR2 534 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 STON2Q8WXE9 905 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 GTPBP3Q969Y2 492 aaKnown RBP8.05□□□□□ -1.12
BRCA1-207ENST00000461798 C3orf49Q96BT1 292 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 TRAF4Q9BUZ4 470 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-207ENST00000461798 ARMC7Q9H6L4 198 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 C12orf10Q9HB07 376 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 TCF7L2Q9NQB0 619 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 SLC7A10Q9NS82 523 aa8.05□□□□□ -1.12
BRCA1-207ENST00000461798 MAGED1Q9Y5V3 778 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-207ENST00000461798 TLN2Q9Y4G6 2542 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 A0A1W2PP18 115 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 CCT8L1PA6NM43 557 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM229AB2RXF0 380 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 ABCD4O14678 606 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 POLR3GO15318 223 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-207ENST00000461798 RAD51DO75771 328 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 AKR7A3O95154 331 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 CD40P25942 277 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 MPGP29372 298 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 STX1BP61266 288 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 TGFBR3Q03167 851 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 TNK1Q13470 666 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 CLEC12BQ2HXU8 276 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 ZNF311Q5JNZ3 666 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 RPS26P11Q5JNZ5 115 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-207ENST00000461798 OTUD3Q5T2D3 398 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-207ENST00000461798 C1orf140Q5VVS0 124 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 SLC2A7Q6PXP3 512 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 KLHL17Q6TDP4 642 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 C6orf89Q6UWU4 347 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 MSRB3Q8IXL7 192 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 GOLGA6L1Q8N7Z2 621 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 LSMEM1Q8N8F7 131 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 POMGNT2Q8NAT1 580 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 OR9K2Q8NGE7 335 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 OR52E4Q8NGH9 312 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 MFSD8Q8NHS3 518 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 BBS10Q8TAM1 723 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 LRRC8CQ8TDW0 803 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 DNAJA3Q96EY1 480 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 ATP6V1G3Q96LB4 118 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 RSPO3Q9BXY4 272 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-207ENST00000461798 SLCO5A1Q9H2Y9 848 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 SLCO1B3Q9NPD5 702 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 SLC17A5Q9NRA2 495 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 FAIMQ9NVQ4 179 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 SLC25A37Q9NYZ2 338 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 HIVEP2P31629 2446 aa8.04□□□□□ -1.12
BRCA1-207ENST00000461798 TRBV5-3A0A0A0MS03 114 aa8.03□□□□□ -1.12
BRCA1-207ENST00000461798 OR6C65A6NJZ3 312 aa8.03□□□□□ -1.12
BRCA1-207ENST00000461798 FTCDNL1E5RQL4 147 aa8.03□□□□□ -1.12
BRCA1-207ENST00000461798 E7EQL1 145 aa8.03□□□□□ -1.12
BRCA1-207ENST00000461798 SMAD7O15105 426 aaKnown RBP8.03□□□□□ -1.12
BRCA1-207ENST00000461798 GPX2P18283 190 aa8.03□□□□□ -1.12
BRCA1-207ENST00000461798 NCF2P19878 526 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-207ENST00000461798 PPIBP23284 216 aaKnown RBP8.03□□□□□ -1.12
BRCA1-207ENST00000461798 PAX7P23759 505 aa8.03□□□□□ -1.12
BRCA1-207ENST00000461798 PRKAR1BP31321 381 aa8.03□□□□□ -1.12
BRCA1-207ENST00000461798 TTKP33981 857 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms