RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 VAMP5O95183 116 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 TFPTP0C1Z6 253 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 SLC25A16P16260 332 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 EPHA3P29320 983 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 CRISP3P54108 245 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 SLC18A1P54219 525 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 PRPS1P60891 318 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 CHRNB3Q05901 458 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 WBP2NLQ6ICG8 309 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 MSANTD1Q6ZTZ1 278 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 ABHD12BQ7Z5M8 362 aaPredicted RBP15.65■□□□□ 0.1
SSB-206ENST00000461708 OR52P1PQ8NH57 321 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 MAELQ96JY0 434 aaKnown RBP15.65■□□□□ 0.1
SSB-206ENST00000461708 PAIP2Q9BPZ3 127 aaKnown RBP15.65■□□□□ 0.1
SSB-206ENST00000461708 WDR55Q9H6Y2 383 aaPredicted RBP15.65■□□□□ 0.1
SSB-206ENST00000461708 YAE1D1Q9NRH1 226 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 RLIMQ9NVW2 624 aa15.65■□□□□ 0.1
SSB-206ENST00000461708 A8MV72 311 aaPredicted RBP15.64■□□□□ 0.09
SSB-206ENST00000461708 A8MVM7 634 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 WNT11O96014 354 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 IFNA2P01563 188 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 CSF3P09919 207 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 PTNP21246 168 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 APOBEC3AP31941 199 aaPredicted RBP15.64■□□□□ 0.09
SSB-206ENST00000461708 WDR4P57081 412 aaKnown RBP15.64■□□□□ 0.09
SSB-206ENST00000461708 COPZ1P61923 177 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 CEACAM7Q14002 265 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 PODNL1Q6PEZ8 512 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 ZNF836Q6ZNA1 936 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 AAED1Q7RTV5 226 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 TMEM99Q8N816 258 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 PNPT1Q8TCS8 783 aaKnown RBP15.64■□□□□ 0.09
SSB-206ENST00000461708 SLC38A5Q8WUX1 472 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 SLC35B4Q969S0 331 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 ZNF317Q96PQ6 595 aaPredicted RBP15.64■□□□□ 0.09
SSB-206ENST00000461708 TNFRSF13CQ96RJ3 184 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 ARMC7Q9H6L4 198 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 SDR39U1Q9NRG7 319 aaPredicted RBP15.64■□□□□ 0.09
SSB-206ENST00000461708 ZIM2Q9NZV7 527 aa15.64■□□□□ 0.09
SSB-206ENST00000461708 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.64■□□□□ 0.09
SSB-206ENST00000461708 V9GYY5 206 aaPredicted RBP15.64■□□□□ 0.09
SSB-206ENST00000461708 NPIPB7O75200 414 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 AKR7A3O95154 331 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 P2RY4P51582 365 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 EFNA4P52798 201 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 VLDLRP98155 873 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 SLC25A3Q00325 362 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 LARS2Q15031 903 aaKnown RBP15.63■□□□□ 0.09
SSB-206ENST00000461708 OR7A5Q15622 319 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 ATG16L1Q676U5 607 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 KLHL24Q6TFL4 600 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 PROX1Q92786 737 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 TAPBPLQ9BX59 468 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 C1QTNF6Q9BXI9 259 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 RMND5AQ9H871 391 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 TPT1P8Q9HAU6 139 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 MOV10Q9HCE1 1003 aaKnown RBP15.63■□□□□ 0.09
SSB-206ENST00000461708 SLC6A13Q9NSD5 602 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 ZNF232Q9UNY5 417 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 ATP23Q9Y6H3 246 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 PMF1-BGLAPU3KQ54 211 aa15.63■□□□□ 0.09
SSB-206ENST00000461708 A0A0G2JPF8 293 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 HNRNPCL2B2RXH8 293 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 HNRNPCL3B7ZW38 293 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 HNRNPCL1O60812 293 aaKnown RBP15.62■□□□□ 0.09
SSB-206ENST00000461708 GKN3PP0CG01 181 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 HNRNPCL4P0DMR1 293 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 ETFAP13804 333 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 CRATP43155 626 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 DSTNP60981 165 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 TMEM249Q2WGJ8 235 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 C3orf36Q3SXR2 165 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 CHRFAM7AQ494W8 412 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 C9orf135Q5VTT2 229 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 PRAMEF8Q5VWM4 474 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 PRAMEF7Q5VXH5 474 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 TMEM225Q6GV28 225 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 HMBOX1Q6NT76 420 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 VRK2Q86Y07 508 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 STK35Q8TDR2 534 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 FAM168AQ92567 244 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 ITCHQ96J02 903 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 ZNF385AQ96PM9 386 aaKnown RBP15.62■□□□□ 0.09
SSB-206ENST00000461708 SPATA9Q9BWV2 254 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 TMEM45AQ9NWC5 275 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 TMEM160Q9NX00 188 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 RASD1Q9Y272 281 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 ZNF443Q9Y2A4 671 aaPredicted RBP15.62■□□□□ 0.09
SSB-206ENST00000461708 IFT52Q9Y366 437 aa15.62■□□□□ 0.09
SSB-206ENST00000461708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.61■□□□□ 0.091e-11■■■□□ 14.9
SSB-206ENST00000461708 TMEM120BA0PK00 339 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 TMEM247A6NEH6 219 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 GPRIN2O60269 458 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 ANP32DO95626 131 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 F12P00748 615 aaPredicted RBP15.61■□□□□ 0.09
SSB-206ENST00000461708 SWI5Q1ZZU3 235 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 C6orf52Q5T4I8 152 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 C1orf140Q5VVS0 124 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 CREB3L2Q70SY1 520 aa15.61■□□□□ 0.09
SSB-206ENST00000461708 CLIP4Q8N3C7 705 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms