RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 E7EQ34 232 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 G3V2L1 256 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 H0YGG7 62 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 H3BMQ9 156 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 H3BNH8 94 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 IFNL4K9M1U5 179 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TFECO14948 347 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC16A5O15375 505 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 KERAO60938 352 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TRIM3O75382 744 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 NADKO95544 446 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 PTBP3O95758 552 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 DDAH2O95865 285 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 DHFRP00374 187 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 CRYABP02511 175 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 OPN1MWP04001 364 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SERPIND1P05546 499 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 HEXAP06865 529 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SMIM6P0DI80 62 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 OPN1MW2P0DN77 364 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 OPN1MW3P0DN78 364 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SAGP10523 405 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ERGP11308 486 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TMEM11P17152 192 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 NCF2P19878 526 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 CCNA2P20248 432 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 EEF1DP29692 281 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ERP29P30040 261 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 CCKBRP32239 447 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 EIF2S3P41091 472 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SERPINB10P48595 397 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 MEOX2P50222 304 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ARSFP54793 590 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 VSX2P58304 361 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SPCS3P61009 180 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 RPS18P62269 152 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 CSNK1G2P78368 415 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 BNIP2Q12982 314 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 PRKAA1Q13131 559 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 AANATQ16613 207 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF181Q2M3W8 571 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 HKDC1Q2TB90 917 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ZFP69Q49AA0 526 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 KLHL12Q53G59 568 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 UNC50Q53HI1 259 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SGO1Q5FBB7 561 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ATP1A1-AS1Q5TC04 95 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 IRAK1BP1Q5VVH5 260 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 AGAP6Q5VW22 663 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SUMO4Q6EEV6 95 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ANKRD26P1Q6NSI1 321 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SCIMPQ6UWF3 145 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TIFABQ6ZNK6 161 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SHISA6Q6ZSJ9 500 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ZCCHC23Q6ZST2 131 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 CREB3L2Q70SY1 520 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 PRSS41Q7RTY9 318 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 VN1R4Q7Z5H5 301 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TMPRSS11BQ86T26 416 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 LUZP2Q86TE4 346 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 PAQR7Q86WK9 346 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TMPRSS12Q86WS5 348 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 CHERPQ8IWX8 916 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 GPALPP1Q8IXQ4 340 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 DNAJC22Q8N4W6 341 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 AMER3Q8N944 861 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 BANPQ8N9N5 519 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF540Q8NDQ6 660 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 OR52B6Q8NGF0 335 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 WDR36Q8NI36 951 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 MGARPQ8TDB4 240 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TCP10LQ8TDR4 215 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SMPDL3AQ92484 453 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TESCQ96BS2 214 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 FBXL8Q96CD0 374 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF501Q96CX3 271 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 REPS1Q96D71 796 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC41A2Q96JW4 573 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 AGAP4Q96P64 663 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM111AQ96PZ2 611 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 FRG2BQ96QU4 278 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 KCNA7Q96RP8 456 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 HBEGFQ99075 208 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TMEM246Q9BRR3 403 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF416Q9BWM5 594 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 CHID1Q9BWS9 393 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 KLHL31Q9H511 634 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 POPDC3Q9HBV1 291 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 MRPS30Q9NP92 439 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ASCL3Q9NQ33 180 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 FBXO8Q9NRD0 319 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 FGF21Q9NSA1 209 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 EXD2Q9NVH0 621 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 HPF1Q9NWY4 346 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 OR6C2Q9NZP2 312 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SH3BP4Q9P0V3 963 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 DHCR7Q9UBM7 475 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 EPHA6Q9UF33 1036 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 SH3BGRL2Q9UJC5 107 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 ERVK-19Q9WJR5 959 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms