RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SLC25A36Q96CQ1 311 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 DPYSL5Q9BPU6 564 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ZNF559Q9BR84 538 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 NRSN2Q9GZP1 204 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 MKKSQ9NPJ1 570 aaPredicted RBP14.2□□□□□ -0.14
LMNB1-203ENST00000460265 PCDHGB7Q9Y5F8 929 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 A0A1B0GWA3 101 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 TNFRSF10CO14798 259 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 SSNA1O43805 119 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ZIC2O95409 532 aaPredicted RBP14.2□□□□□ -0.14
LMNB1-203ENST00000460265 SYPP08247 313 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 NID1P14543 1247 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 GFERP55789 205 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 CDK5Q00535 292 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 DECR1Q16698 335 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 KIAA0895LQ68EN5 471 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ARL14Q8N4G2 192 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 COQ8AQ8NI60 647 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 LDAHQ9H6V9 325 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 C2orf42Q9NWW7 574 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 LRIT1Q9P2V4 623 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 PCDHGA9Q9Y5G4 932 aaKnown RBP14.2□□□□□ -0.14
LMNB1-203ENST00000460265 IER3IP1Q9Y5U9 82 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ELOA3DA6NLF2 546 aaPredicted RBP14.2□□□□□ -0.14
LMNB1-203ENST00000460265 OMPP47874 163 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 FABP5Q01469 135 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 DEFA5Q01523 94 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 PUDPQ08623 228 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ARHGAP11BQ3KRB8 267 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ELOA3BQ3SY89 546 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 TP53I3Q53FA7 332 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ZNF620Q6ZNG0 422 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 SLC22A18ASQ8N1D0 253 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 FTMTQ8N4E7 242 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ELOA3Q8NG57 546 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 CREB3L1Q96BA8 519 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 FN3KQ9H479 309 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 NUDT15Q9NV35 164 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 HYKKA2RU49 373 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 KRBOX1C9JBD0 128 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 F8W036 122 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 H7C2Y5 167 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 IL1AP01583 271 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 FPR3P25089 353 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 DOC2BQ14184 412 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 FAM27D1Q5T7N8 215 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 DGAT2L6Q6ZPD8 337 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 CEACAM19Q7Z692 300 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 PM20D2Q8IYS1 436 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 ZC3HAV1LQ96H79 300 aaKnown RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 NPAS1Q99742 590 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 PELOQ9BRX2 385 aaKnown RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 NDC1Q9BTX1 674 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 SPRTNQ9H040 489 aaPredicted RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 SRA1Q9HD15 236 aaKnown RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 PLEKHB1Q9UF11 243 aaPredicted RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 KIF26AQ9ULI4 1882 aaPredicted RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 ATP12AP54707 1039 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 CTBP2P56545 445 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 ELOCQ15369 112 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 CA13Q8N1Q1 262 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 C19orf47Q8N9M1 422 aaKnown RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 KIAA1143Q96AT1 154 aaPredicted RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 C10orf90Q96M02 699 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 ABCG5Q9H222 651 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 TTYH1Q9H313 450 aaPredicted RBP14.19□□□□□ -0.14
LMNB1-203ENST00000460265 GNG8Q9UK08 70 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 IKZF2Q9UKS7 526 aa14.19□□□□□ -0.14
LMNB1-203ENST00000460265 FAM25EA8MYX2 175 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 LDOC1O95751 146 aaPredicted RBP14.18□□□□□ -0.14
LMNB1-203ENST00000460265 GLAP06280 429 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 PIPP12273 146 aaPredicted RBP14.18□□□□□ -0.14
LMNB1-203ENST00000460265 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
LMNB1-203ENST00000460265 CXCL3P19876 107 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 PPP3R1P63098 170 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 CCDC157Q569K6 752 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 MTFR2Q6P444 385 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 MZT2AQ6P582 158 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 C19orf48Q6RUI8 117 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 OR2L13Q8N349 312 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 TMEM99Q8N816 258 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 FAM181AQ8N9Y4 354 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 BEST4Q8NFU0 473 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 OR11H7Q8NGC8 314 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 BEX1Q9HBH7 125 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 PDE7BQ9NP56 450 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 SLC39A1Q9NY26 324 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 PLCL2Q9UPR0 1127 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 KCNMB2Q9Y691 235 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 LTBP2Q14767 1821 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 SPTY2D1-AS1A0A0U1RR47 76 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 SLC22A23A1A5C7 686 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 SEC14L5O43304 696 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 LALBAP00709 142 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 APOC1P02654 83 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 LIMS3P0CW19 117 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 LIMS4P0CW20 117 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 FOXK2Q01167 660 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 THSD4Q6ZMP0 1018 aa14.18□□□□□ -0.14
LMNB1-203ENST00000460265 SYT9Q86SS6 491 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms