RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 C14orf79Q96F83 325 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 OXGR1Q96P68 337 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 RIMS3Q9UJD0 308 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 CPSF4LA6NMK7 179 aaKnown RBP9.54□□□□□ -0.88
UBR4-208ENST00000459947 A8MXE2 369 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 ADAM11O75078 769 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 CDH12P55289 794 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 SIRPAP78324 504 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 H3F3AP84243 136 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 STK11Q15831 433 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 SP5Q6BEB4 398 aaPredicted RBP9.54□□□□□ -0.88
UBR4-208ENST00000459947 LCN8Q6JVE9 175 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 H1FNTQ75WM6 255 aaPredicted RBP9.54□□□□□ -0.88
UBR4-208ENST00000459947 POMGNT2Q8NAT1 580 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 ADAMTS16Q8TE57 1224 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 STARD4Q96DR4 205 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 OR11A1Q9GZK7 315 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 B3GAT2Q9NPZ5 323 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 NOSIPQ9Y314 301 aaKnown RBP9.54□□□□□ -0.88
UBR4-208ENST00000459947 DOCK7Q96N67 2140 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 UMPSP11172 480 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 IMPDH2P12268 514 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 CPOXP36551 454 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 IFNGR2P38484 337 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 DHFR2Q86XF0 187 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 DMRTC2Q8IXT2 367 aaPredicted RBP9.54□□□□□ -0.88
UBR4-208ENST00000459947 C10orf67Q8IYJ2 551 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 ROBO4Q8WZ75 1007 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 APH1AQ96BI3 265 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 PYURFQ96I23 114 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 NPAS1Q99742 590 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 KLHDC3Q9BQ90 382 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 PSD2Q9BQI7 771 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 NGBQ9NPG2 151 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 NOX1Q9Y5S8 564 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 ARPC2O15144 300 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 CLDN1O95832 211 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 POU2F1P14859 743 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 IGFBP2P18065 325 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 FPR1P21462 350 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 UQCRC1P31930 480 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 SLC9A3P48764 834 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 TMEM225Q6GV28 225 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 MYO7BQ6PIF6 2116 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 RRM2BQ7LG56 351 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 C10orf53Q8N6V4 93 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 NAXEQ8NCW5 288 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 ANKK1Q8NFD2 765 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 ZNF426Q9BUY5 554 aa9.54□□□□□ -0.88
UBR4-208ENST00000459947 MRPL33O75394 65 aaKnown RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 SMNDC1O75940 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBR4-208ENST00000459947 UBOX5O94941 541 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 ZP4Q12836 540 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 C1DQ13901 141 aaKnown RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 TRIM25Q14258 630 aaKnown RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 GDF7Q7Z4P5 450 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 BTLAQ7Z6A9 289 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 P2RY8Q86VZ1 359 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 GCNT2Q8N0V5 402 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 ASB9Q96DX5 294 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 SGTBQ96EQ0 304 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 ARL5BQ96KC2 179 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 ADAD1Q96M93 576 aaKnown RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 BTBD10Q9BSF8 475 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 SLC7A7Q9UM01 511 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 KIAA1549Q9HCM3 1950 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 SPEGQ15772 3267 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 AQP12BA6NM10 295 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 CENPBD1B2RD01 187 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 FTCDNL1E5RQL4 147 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 CGAP01215 116 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 BGLAPP02818 100 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 SH3BGRP55822 239 aaPredicted RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 TFF3Q07654 80 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 FAM205BPQ63HN1 556 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 AQP12AQ8IXF9 295 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 OR5J2Q8NH18 312 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 DACH2Q96NX9 599 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 HIVEP3Q5T1R4 2406 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 PCNX3Q9H6A9 2034 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 ZNF716A6NP11 495 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 H0YC42 278 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 C16orf97H3BN30 126 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 CASKO14936 926 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 DNAJC8O75937 253 aaPredicted RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 PSMB1P20618 241 aaKnown RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 TPD52P55327 224 aaPredicted RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 TGFBR3Q03167 851 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 PMS2P3Q13401 168 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 NCCRP1Q6ZVX7 275 aaPredicted RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 UEVLDQ8IX04 471 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 TMEM239Q8WW34 195 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 LIPHQ8WWY8 451 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 ACOT11Q8WXI4 607 aaPredicted RBP9.53□□□□□ -0.88
UBR4-208ENST00000459947 LINC00470Q9BZP3 86 aa9.53□□□□□ -0.88
UBR4-208ENST00000459947 OPN1LWP04000 364 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 H1F0P07305 194 aaKnown RBP9.52□□□□□ -0.89
UBR4-208ENST00000459947 ZNF43P17038 809 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 BNIP1Q12981 228 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 FAM98BQ52LJ0 330 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms