RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 ZNF317Q96PQ6 595 aaPredicted RBP12.45□□□□□ -0.42
NECAP2-204ENST00000459640 FOXC2Q99958 501 aa12.45□□□□□ -0.42
NECAP2-204ENST00000459640 PTDSS2Q9BVG9 487 aa12.45□□□□□ -0.42
NECAP2-204ENST00000459640 NANOGQ9H9S0 305 aa12.45□□□□□ -0.42
NECAP2-204ENST00000459640 SELENONQ9NZV5 590 aa12.45□□□□□ -0.42
NECAP2-204ENST00000459640 TESQ9UGI8 421 aaKnown RBP12.45□□□□□ -0.42
NECAP2-204ENST00000459640 USP22Q9UPT9 525 aa12.45□□□□□ -0.42
NECAP2-204ENST00000459640 MED13LQ71F56 2210 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 TPST2O60704 377 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 NPIPB7O75200 414 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 RAD51DO75771 328 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 CD53P19397 219 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 COX5AP20674 150 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 PCGF2P35227 344 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 GZMMP51124 257 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 FOXG1P55316 489 aaPredicted RBP12.44□□□□□ -0.42
NECAP2-204ENST00000459640 RBBP4Q09028 425 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 FAPQ12884 760 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 DUSP7Q16829 419 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 DEFB113Q30KQ7 82 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 ALG10BQ5I7T1 473 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 C9orf135Q5VTT2 229 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 FBXW9Q5XUX1 488 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 C6orf89Q6UWU4 347 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 POU5F2Q8N7G0 328 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 LSMEM1Q8N8F7 131 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 BHLHE22Q8NFJ8 381 aaPredicted RBP12.44□□□□□ -0.42
NECAP2-204ENST00000459640 GPR32P1Q8NGA4 272 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 OR9K2Q8NGE7 335 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 STK35Q8TDR2 534 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 TAMM41Q96BW9 452 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 ZNF385AQ96PM9 386 aaKnown RBP12.44□□□□□ -0.42
NECAP2-204ENST00000459640 SH3GL1Q99961 368 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 TRIM2Q9C040 744 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 SEC14L4Q9UDX3 406 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 SLC9A8Q9Y2E8 581 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 CAPN7Q9Y6W3 813 aa12.44□□□□□ -0.42
NECAP2-204ENST00000459640 IGKV1D-42A0A075B6H8 117 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 BBIP1A8MTZ0 92 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 FTCDNL1E5RQL4 147 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 M0QX08 132 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 GGT1P19440 569 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 CBLP22681 906 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 P2RY4P51582 365 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 OR1Q1Q15612 314 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 TMEM225Q6GV28 225 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 SEZ6L2Q6UXD5 910 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 ZNF704Q6ZNC4 412 aaPredicted RBP12.43□□□□□ -0.42
NECAP2-204ENST00000459640 SLC30A8Q8IWU4 369 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 KDM8Q8N371 416 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 ZNF433Q8N7K0 673 aaPredicted RBP12.43□□□□□ -0.42
NECAP2-204ENST00000459640 ZIC4Q8N9L1 334 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 PCYOX1LQ8NBM8 494 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 VANGL1Q8TAA9 524 aaPredicted RBP12.43□□□□□ -0.42
NECAP2-204ENST00000459640 RCN3Q96D15 328 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 MBD6Q96DN6 1003 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 ARHGDIGQ99819 225 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 ECSITQ9BQ95 431 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 CXXC4Q9H2H0 198 aa12.43□□□□□ -0.42
NECAP2-204ENST00000459640 A0A0B4J2E0 115 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 A0A1B0GX12 115 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 A0A1W2PR80 420 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CIB4A0PJX0 185 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CCT8L1PA6NM43 557 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CPSF4LA6NMK7 179 aaKnown RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CNOT4O95628 575 aaKnown RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 LGI1O95970 557 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 ITGA5P08648 1049 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 PNMTP11086 282 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CD247P20963 164 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 GTF2E2P29084 291 aaKnown RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CRYBA2P53672 197 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 NR1H2P55055 460 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 LGALS3BPQ08380 585 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 PPA1Q15181 289 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 NPTX1Q15818 432 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 ACKR1Q16570 336 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 VMACQ2NL98 169 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 COQ5Q5HYK3 327 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 AAED1Q7RTV5 226 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 PATL1Q86TB9 770 aaKnown RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 RANBP3LQ86VV4 465 aaPredicted RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CALHM3Q86XJ0 350 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 RBM45Q8IUH3 476 aaKnown RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 OR8J3Q8NGG0 315 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 MFSD8Q8NHS3 518 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 SLC26A7Q8TE54 656 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 DNAJA4Q8WW22 397 aaPredicted RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 TAAR8Q969N4 342 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 ALPK1Q96QP1 1244 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 MCHR1Q99705 422 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 CCL19Q99731 98 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 SF3B5Q9BWJ5 86 aaKnown RBP12.42□□□□□ -0.42
NECAP2-204ENST00000459640 C12orf10Q9HB07 376 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 TMEM27Q9HBJ8 222 aa12.42□□□□□ -0.42
NECAP2-204ENST00000459640 SLC7A10Q9NS82 523 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms