RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 YOD1Q5VVQ6 348 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 PARS2Q7L3T8 475 aaKnown RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 LINC01555Q8NAE3 123 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 SDR9C7Q8NEX9 313 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 OR4C16Q8NGL9 310 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 OR2L2Q8NH16 312 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ADAMTS15Q8TE58 950 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ZNRF4Q8WWF5 429 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 COL26A1Q96A83 441 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 DTD2Q96FN9 168 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TSNAXQ99598 290 aaKnown RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF559Q9BR84 538 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 GPR174Q9BXC1 333 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TSPAN10Q9H1Z9 355 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 DPEP2Q9H4A9 486 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 SYNPO2LQ9H987 977 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 CTSFQ9UBX1 484 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ADAM29Q9UKF5 820 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 KCNK7Q9Y2U2 307 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 NPIPA5A0A0B4J1W7 369 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TRAPPC13A5PLN9 417 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF879B4DU55 563 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 NPIPA7E9PJI5 369 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 RCBTB2O95199 551 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 EFEMP2O95967 443 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 F12P00748 615 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 NPIPA8P0DM63 369 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 CERS1P27544 350 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ITPKBP27987 946 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 STARP49675 285 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 VASPP50552 380 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 LUMP51884 338 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 UBE2IP63279 158 aaKnown RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ACTC1P68032 377 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ACTA1P68133 377 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TNFRSF17Q02223 184 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 OR1Q1Q15612 314 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF528Q3MIS6 628 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 MRM1Q6IN84 353 aaKnown RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 HAGHLQ6PII5 290 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 MAMSTRQ6ZN01 415 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 MOB3CQ70IA8 216 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF546Q86UE3 836 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM17Q86X19 198 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 DCUN1D3Q8IWE4 304 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 EID2Q8N6I1 236 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ACOT4Q8N9L9 421 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 PCSK9Q8NBP7 692 aaKnown RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 OR4K13Q8NH42 304 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 DUSP19Q8WTR2 217 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 HAVCR1Q96D42 359 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 CMTM3Q96MX0 182 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TNFRSF13CQ96RJ3 184 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 CMSS1Q9BQ75 279 aaKnown RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 MENTQ9BUN1 341 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM185BQ9H7F4 350 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 IL21RQ9HBE5 538 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 MEPEQ9NQ76 525 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 STARD7Q9NQZ5 370 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 IL36AQ9UHA7 158 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 CES1P1Q9UKY3 287 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 WDR45Q9Y484 360 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 V9GY05 133 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 HEATR5BQ9P2D3 2071 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 MDC1Q14676 2089 aaKnown RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 DENND4AQ7Z401 1863 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 KPNA3O00505 521 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 ADAM11O75078 769 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 ADCYAP1P18509 176 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 CSNK2A2P19784 350 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 HIST1H1TP22492 207 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 GRPRP30550 384 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 MPIP34949 423 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 KCNJ3P48549 501 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 NANOS3P60323 173 aaKnown RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 POLR2GP62487 172 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 TRA2BP62995 288 aaKnown RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 GUCA2AQ02747 115 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 SCRN3Q0VDG4 424 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 C4orf46Q504U0 113 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 MANEAQ5SRI9 462 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 RPL22L1Q6P5R6 122 aaKnown RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 UNQ9370/PRO34162Q6UXP9 181 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 RNF180Q86T96 592 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 ZFP82Q8N141 532 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 OR52E2Q8NGJ4 325 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 OR51S1Q8NGJ8 323 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 RGP1Q92546 391 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 DVL3Q92997 716 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 TCEAL4Q96EI5 215 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 IGSF21Q96ID5 467 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 MNTQ99583 582 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 ACTRT3Q9BYD9 372 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 SLC19A3Q9BZV2 496 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 XKR8Q9H6D3 395 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 CALML5Q9NZT1 146 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 RFPL4AA6NLU0 287 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms