RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LINC01555Q8NAE3 123 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 OR10K1Q8NGX5 313 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 TNFAIP8L1Q8WVP5 186 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ORAI1Q96D31 301 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 TCEAL4Q96EI5 215 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF681Q96N22 645 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF558Q96NG5 402 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 FERD3LQ96RJ6 166 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 GFI1Q99684 422 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 C14orf105Q9NVL8 296 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 OR5V1Q9UGF6 321 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 DENND4CQ5VZ89 1909 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 IGKV1-8A0A0C4DH67 115 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 ACOD1A6NK06 481 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 C4orf51C9J302 202 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 SPINT1O43278 529 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 RLN2P04090 185 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 DBIP07108 87 aaKnown RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 PTHLHP12272 177 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 MNDAP41218 407 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 HOXA1P49639 335 aaPredicted RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 FGL1Q08830 312 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 METRNLQ641Q3 311 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 FAM111BQ6SJ93 734 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 LRRN1Q6UXK5 716 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 GLB1L2Q8IW92 636 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 OR52E2Q8NGJ4 325 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 COL26A1Q96A83 441 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 MIB2Q96AX9 1013 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 MRPS30Q9NP92 439 aaKnown RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 PRSS16Q9NQE7 514 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 ANKRD10Q9NXR5 420 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 SLC6A5Q9Y345 797 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 FAM74A7A6NL05 159 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 PIN1P1O15428 100 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 IGF2P01344 180 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 MPGP29372 298 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 PSMB10P40306 273 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 NAA10P41227 235 aaPredicted RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 STARP49675 285 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 AKR1D1P51857 326 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 FAM74A3Q4VXF1 159 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 KRT77Q7Z794 578 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 PAQR7Q86WK9 346 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 CCDC36Q8IYA8 594 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 RELL2Q8NC24 303 aaPredicted RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 OR7G2Q8NG99 324 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 SDF2Q99470 211 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 MRTO4Q9UKD2 239 aaKnown RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF281Q9Y2X9 895 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 ETV7Q9Y603 341 aa12.62□□□□□ -0.39
PTPRE-204ENST00000455661 TCF20Q9UGU0 1960 aaKnown RBP12.62□□□□□ -0.39
PTPRE-204ENST00000455661 LYPD3O95274 346 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 EGFP01133 1207 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 MGMTP16455 207 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 CD96P40200 585 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 METAP1P53582 386 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 SORDQ00796 357 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 SCRN3Q0VDG4 424 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 COL9A2Q14055 689 aaPredicted RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 MELKQ14680 651 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 C2orf68Q2NKX9 166 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 PCGF3Q3KNV8 242 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 MRPL2Q5T653 305 aaKnown RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 LSRQ86X29 649 aaPredicted RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF619Q8N2I2 560 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 TNFRSF13CQ96RJ3 184 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 TMEM27Q9HBJ8 222 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 TCF7L1Q9HCS4 588 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 NCDNQ9UBB6 729 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 NDRG3Q9UGV2 375 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 MLXQ9UH92 298 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 TET1Q8NFU7 2136 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 COL4A6Q14031 1691 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 CENPVL1A0A0U1RR11 272 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 RFPL4AA6NLU0 287 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 RFPL4AL1F8VTS6 287 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 CSF1P09603 554 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 HOXB1P14653 301 aaPredicted RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 TSFMP43897 325 aaKnown RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 CAP1Q01518 475 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 PON3Q15166 354 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 DUSP5Q16690 384 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 MTSS1LQ765P7 747 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 MUC20Q8N307 709 aaPredicted RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 SLC43A2Q8N370 569 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 LRRC25Q8N386 305 aaPredicted RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 CAMKVQ8NCB2 501 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 OR2A1Q8NGT9 310 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 NARS2Q96I59 477 aaKnown RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 LRFN5Q96NI6 719 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 C6orf106Q9H6K1 298 aaPredicted RBP12.61□□□□□ -0.39
PTPRE-204ENST00000455661 SCPEP1Q9HB40 452 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 USP36Q9P275 1121 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms