RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 GPR171O14626 319 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 GSTA4O15217 222 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 AHSA1O95433 338 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 THRBP10828 461 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 COX6B1P14854 86 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 FPR1P21462 350 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 OR2B6P58173 313 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 CEACAM7Q14002 265 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 SLC17A1Q14916 467 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 TMEM201Q5SNT2 666 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 FAM69AQ5T7M9 428 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF787Q6DD87 383 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 MEX3BQ6ZN04 569 aaKnown RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 LSRQ86X29 649 aaPredicted RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 KIF18BQ86Y91 864 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 TUSC5Q8IXB3 177 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 ADPRHL1Q8NDY3 354 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 VANGL1Q8TAA9 524 aaPredicted RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 CDRT15Q96T59 188 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 PRSS27Q9BQR3 290 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 NAA11Q9BSU3 229 aaPredicted RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 SF3B5Q9BWJ5 86 aaKnown RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 RBM24Q9BX46 236 aaKnown RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 SLC19A3Q9BZV2 496 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 OPN3Q9H1Y3 402 aaPredicted RBP12.77□□□□□ -0.37
COL3A1-203ENST00000450867 GALNT8Q9NY28 637 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 ELOVL5Q9NYP7 299 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 SELENONQ9NZV5 590 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 EMC3Q9P0I2 261 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 MAGEL2Q9UJ55 1249 aa12.77□□□□□ -0.37
COL3A1-203ENST00000450867 ALPK2Q86TB3 2170 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 CPSF4LA6NMK7 179 aaKnown RBP12.76□□□□□ -0.37
COL3A1-203ENST00000450867 B2RBV5 119 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 RAMP1O60894 148 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 VAMP5O95183 116 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 OR5F1O95221 314 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 IGF2P01344 180 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 TNFRSF1BP20333 461 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 CD79BP40259 229 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 MFSD13AQ14CX5 517 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 POU4F3Q15319 338 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 OR7A5Q15622 319 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 GLYATQ6IB77 296 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 TFAP2EQ6VUC0 442 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 NUFIP2Q7Z417 695 aaKnown RBP12.76□□□□□ -0.37
COL3A1-203ENST00000450867 VTCN1Q7Z7D3 282 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 LUZP2Q86TE4 346 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 CCDC103Q8IW40 242 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 RNF148Q8N7C7 305 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF610Q8N9Z0 462 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 GEMIN6Q8WXD5 167 aaKnown RBP12.76□□□□□ -0.37
COL3A1-203ENST00000450867 TAAR8Q969N4 342 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 SLC41A3Q96GZ6 507 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF300Q96RE9 604 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-203ENST00000450867 EPYCQ99645 322 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 TAPBPLQ9BX59 468 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 DCAF13Q9NV06 445 aaKnown RBP12.76□□□□□ -0.37
COL3A1-203ENST00000450867 KCNN3Q9UGI6 736 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 PRR14LQ5THK1 2151 aa12.76□□□□□ -0.37
COL3A1-203ENST00000450867 SMNDC1O75940 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL3A1-203ENST00000450867 CNOT4O95628 575 aaKnown RBP12.75□□□□□ -0.37
COL3A1-203ENST00000450867 SERPINA1P01009 418 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 BGLAPP02818 100 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 NCK1P16333 377 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 UQCRC1P31930 480 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 OR1E2P47887 323 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 OR3A2P47893 321 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 MXRA7P84157 204 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 IFI44LQ53G44 452 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 OTUD3Q5T2D3 398 aaPredicted RBP12.75□□□□□ -0.37
COL3A1-203ENST00000450867 BEND4Q6ZU67 534 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 GDF7Q7Z4P5 450 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 GALNT5Q7Z7M9 940 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF295-AS1Q8N0V1 137 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 TMEM99Q8N816 258 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 FAM162AQ96A26 154 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 MARVELD3Q96A59 401 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 DNAJA3Q96EY1 480 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 TPD52L3Q96J77 140 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 HSH2DQ96JZ2 352 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 PRRC1Q96M27 445 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 TEX15Q9BXT5 2789 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 TAS2R1Q9NYW7 299 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 EGFL7Q9UHF1 273 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 RPS6KA6Q9UK32 745 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 SLC7A7Q9UM01 511 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 A4GNTQ9UNA3 340 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 FLVCR1Q9Y5Y0 555 aa12.75□□□□□ -0.37
COL3A1-203ENST00000450867 ANKRD17O75179 2603 aaKnown RBP12.74□□□□□ -0.37
COL3A1-203ENST00000450867 LOC102725191A0A1B0GVB3 256 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 ARPC2O15144 300 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 AKR7A3O95154 331 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF682O95780 498 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 IFNW1P05000 195 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 CCKARP32238 428 aa12.74□□□□□ -0.37
COL3A1-203ENST00000450867 RBM34P42696 430 aaKnown RBP12.74□□□□□ -0.37
COL3A1-203ENST00000450867 RPS5P46782 204 aaKnown RBP12.74□□□□□ -0.37
COL3A1-203ENST00000450867 RINLQ6ZS11 566 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms