RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CLINT1Q14677 625 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 LY6G6FQ5SQ64 297 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 RPTNQ6XPR3 784 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 ETV3LQ6ZN32 361 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 ACOT7LQ6ZUV0 252 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TGIF2LXQ8IUE1 241 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 LINC01599Q8WXQ3 324 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 BRI3BPQ8WY22 251 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 MYLIPQ8WY64 445 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 ZNF607Q96SK3 696 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 CCDC86Q9H6F5 360 aaKnown RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 SGK2Q9HBY8 427 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TMEM100Q9NV29 134 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 FAM96BQ9Y3D0 163 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 AK6Q9Y3D8 172 aaKnown RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 FAM183AA6NL82 134 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 GAPDHSO14556 408 aaPredicted RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 ARL6IP5O75915 188 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 SLC2A10O95528 541 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 IFNA10P01566 189 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 GBAP04062 536 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 IL3P08700 152 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 HIST1H1BP16401 226 aaKnown RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 TYMPP19971 482 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 RAB5AP20339 215 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 ACRV1P26436 265 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 S100A2P29034 98 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 IFNGR2P38484 337 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 AKR1C3P42330 323 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 PFN3P60673 137 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 HGFACQ04756 655 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 PJVKQ0ZLH3 352 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TSPAN31Q12999 210 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 PDE7AQ13946 482 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TGIF1Q15583 401 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 NDUFAF6Q330K2 333 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TMEM69Q5SWH9 247 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TMEM244Q5VVB8 128 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 OR10K2Q6IF99 312 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TCEAL6Q6IPX3 200 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 C11orf87Q6NUJ2 197 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 COMTD1Q86VU5 262 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 CPOQ8IVL8 374 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 SCN4BQ8IWT1 228 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 RASGEF1AQ8N9B8 481 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 OR10H4Q8NGA5 316 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 DUSP19Q8WTR2 217 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 RNF141Q8WVD5 230 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 GHSRQ92847 366 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 RAB8BQ92930 207 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 MISP3Q96FF7 219 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TAAR9Q96RI9 348 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 SPOCK3Q9BQ16 436 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 PIGQQ9BRB3 760 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 MESP1Q9BRJ9 268 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 R3HDMLQ9H3Y0 253 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TMEM27Q9HBJ8 222 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 NMRK2Q9NPI5 230 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 HINT3Q9NQE9 182 aaKnown RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 ADARB2Q9NS39 739 aaKnown RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 SLC45A1Q9Y2W3 748 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 A0A087WUU8 490 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 A0A087X0M5 115 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 A0A1B0GX30 115 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 ANKRD61A6NGH8 418 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 H0YIV9 168 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 PRAMEF12O95522 483 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 FGF19O95750 216 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 C8GP07360 202 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 SLC25A4P12235 298 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 XPAP23025 273 aaPredicted RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 ACKR3P25106 362 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 MPIP34949 423 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 CASRP41180 1078 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 GLP1RP43220 463 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 HSD17B7P56937 341 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 OR2B8PP59922 312 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 TWF1Q12792 350 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 GPNMBQ14956 572 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 ATXN7L3Q14CW9 347 aaPredicted RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 ELAVL1Q15717 326 aaKnown RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 PGGHGQ32M88 737 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 LRRC37A5PQ49AS3 106 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 KRBOX4Q5JUW0 171 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 CRTC1Q6UUV9 634 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 PRSS55Q6UWB4 352 aaPredicted RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 SERPINA13PQ6UXR4 307 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 UNQ6494/PRO21346Q6UXR6 183 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 UNQ6126/PRO20091Q6UXV3 157 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 GID4Q8IVV7 300 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 SDR9C7Q8NEX9 313 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 OR10R2Q8NGX6 335 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 OR6N1Q8NGY5 312 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 SMPDL3BQ92485 455 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 MYEOVQ96EZ4 313 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 FAM46AQ96IP4 442 aaKnown RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 C4orf36Q96KX1 117 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 PRRC1Q96M27 445 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 HSPA12BQ96MM6 686 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 TEX101Q9BY14 249 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms