RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SCAMP2O15127 329 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 LYZL6O75951 148 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 GADD45GO95257 159 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 FMO3P31513 532 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RAP1BP61224 184 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RAP1AP62834 184 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RPS26P62854 115 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TRIM25Q14258 630 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 UBAP2Q5T6F2 1119 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TIGD3Q6B0B8 471 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 WBP2NLQ6ICG8 309 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PRR18Q8N4B5 295 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SETD9Q8NE22 299 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ITFG2Q969R8 447 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 COMMD4Q9H0A8 199 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SIP14410 1827 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 E9PQ18 207 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 FGF17O60258 216 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 ACTL6AO96019 429 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 OPN1SWP03999 348 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 DEFA4P12838 97 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF3P17036 446 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CALB2P22676 271 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CSF2RBP32927 897 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 MAD2L1BPQ15013 274 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 NRF1Q16656 503 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 TIFABQ6ZNK6 161 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 GDPD3Q7L5L3 318 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC15A3Q8IY34 581 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 DNAJC22Q8N4W6 341 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 SNRNP40Q96DI7 357 aaKnown RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 MARCH7Q9H992 704 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 UFSP2Q9NUQ7 469 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 TMEM181Q9P2C4 612 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 PCDHGB1Q9Y5G3 927 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 PCDHGA9Q9Y5G4 932 aaKnown RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 HTR5AP47898 357 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 POLR2HP52434 150 aaKnown RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 KCNJ10P78508 379 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 UNC50Q53HI1 259 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 GLYATQ6IB77 296 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 LINGO2Q7L985 606 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 PXKQ7Z7A4 578 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 LILRA2Q8N149 483 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 RBM15BQ8NDT2 890 aaKnown RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLPP5Q8NEB5 264 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 FNDC8Q8TC99 324 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 SFXN5Q8TD22 340 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 MAGEE2Q8TD90 523 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CPNE4Q96A23 557 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 EVA1AQ9H8M9 152 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CORINQ9Y5Q5 1042 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZSWIM8A7E2V4 1837 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A1B0GVI7 797 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 H7C2Y5 167 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CD160O95971 181 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 IGHG1P01857 330 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 FABP3P05413 133 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLEC3BP05452 202 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 DSCR4P56555 118 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLDN8P56748 225 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR8G1Q15617 311 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 GAB4Q2WGN9 574 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 LRRC10Q5BKY1 277 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 METTL11BQ5VVY1 283 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 IGDCC3Q8IVU1 814 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 PDZD9Q8IXQ8 264 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 C1orf162Q8NEQ5 155 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR4S1Q8NGB4 309 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF671Q8TAW3 534 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 ROPN1LQ96C74 230 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 APIPQ96GX9 242 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 CPPED1Q9BRF8 314 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 PIGMQ9H3S5 423 aa5.15□□□□□ -1.58
CDC42BPA-209ENST00000448940 LRRK2Q5S007 2527 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 TCF21O43680 179 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 CTSVO60911 334 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 EPHA1P21709 976 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 IL5RAQ01344 420 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 POU3F1Q03052 451 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 TRAP1Q12931 704 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 GANABQ14697 944 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 DPY19L2P1Q6NXN4 242 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 POC5Q8NA72 575 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR8B3Q8NGG8 313 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 PIK3R3Q92569 461 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZG16BQ96DA0 208 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 ANAPC16Q96DE5 110 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR8B2Q96RD0 313 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF347Q96SE7 839 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 SGPP1Q9BX95 441 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC52A3Q9NQ40 469 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 GLRX2Q9NS18 164 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 CCM2LQ9NUG4 571 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 FKBP14Q9NWM8 211 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 LPAR3Q9UBY5 353 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 A0A096LPE4 126 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 A0A0B4J203 849 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 A0A1W2PPZ6 126 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 SERINC4A6NH21 518 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms