RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CYTH2Q99418 400 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 SYT11Q9BT88 431 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 DGCR6LQ9BY27 220 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 FRMD8P1Q9BZ68 369 aaPredicted RBP3.18□□□□□ -1.9
PMS1-216ENST00000447734 WDR13Q9H1Z4 485 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 DDX31Q9H8H2 851 aaKnown RBP3.18□□□□□ -1.9
PMS1-216ENST00000447734 TMEM165Q9HC07 324 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 CSNK1G1Q9HCP0 422 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 THUMPD1Q9NXG2 353 aaKnown RBP3.18□□□□□ -1.9
PMS1-216ENST00000447734 EHFQ9NZC4 300 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 ADAM22Q9P0K1 906 aa3.18□□□□□ -1.9
PMS1-216ENST00000447734 WARS2Q9UGM6 360 aaKnown RBP3.18□□□□□ -1.9
PMS1-216ENST00000447734 PLEKHH1Q9ULM0 1364 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 TRAV6A0A075B6T7 132 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 A0A087WW49 117 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 BCLAF3A2AJT9 711 aaKnown RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 WDR91A4D1P6 747 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 G3V2L1 256 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 HSD17B6O14756 317 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ERLIN2O94905 339 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 LYPD3O95274 346 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 SMC2O95347 1197 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PPP1R3DO95685 299 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PIGRP01833 764 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 HLA-HP01893 362 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 CRYAAP02489 173 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PMCHP20382 165 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 GABRR2P28476 465 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 IL12AP29459 219 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 MAP2K2P36507 400 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ACVR1BP36896 505 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 VHLP40337 213 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ELK3P41970 407 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ATP4BP51164 291 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 CCNHP51946 323 aaPredicted RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 ERVK-25P63136 954 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 VLDLRP98155 873 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PUDPQ08623 228 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 OR5I1Q13606 314 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 OXA1LQ15070 435 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 NECTIN1Q15223 517 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 VAMP3Q15836 100 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 DGUOKQ16854 277 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 HLA-BQ31612 363 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 VWA2Q5GFL6 755 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 SLC35E4Q6ICL7 350 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 OR52E8Q6IFG1 317 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 GDPD4Q6W3E5 623 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.17□□□□□ -1.9
PMS1-216ENST00000447734 FRRS1Q6ZNA5 592 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 C9orf139Q6ZV77 190 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 FRA10AC1Q70Z53 315 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 HDDC2Q7Z4H3 204 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 CARM1Q86X55 608 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PRIMA1Q86XR5 153 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ZNF100Q8IYN0 542 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 CIARTQ8N365 385 aaPredicted RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 MS4A15Q8N5U1 240 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PRSS33Q8NF86 280 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 OR2T6Q8NHC8 308 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ZPLD1Q8TCW7 415 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ANP32BQ92688 251 aaKnown RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 FAM131CQ96AQ9 280 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 TMEM80Q96HE8 168 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 MS4A14Q96JA4 679 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ART5Q96L15 291 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 CYP2S1Q96SQ9 504 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 TMEM204Q9BSN7 226 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 UCK2Q9BZX2 261 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 OR52A5Q9H2C5 316 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 MOB1AQ9H8S9 216 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 MRPL47Q9HD33 250 aaKnown RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 DMAP1Q9NPF5 467 aaPredicted RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 EXOSC3Q9NQT5 275 aaKnown RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 ZNF302Q9NR11 478 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 SPHK2Q9NRA0 654 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 SAMSN1Q9NSI8 373 aaKnown RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 ZFP57Q9NU63 452 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 TXLNGQ9NUQ3 528 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PAK1IP1Q9NWT1 392 aaPredicted RBP3.17□□□□□ -1.9
PMS1-216ENST00000447734 ADA2Q9NZK5 511 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 SLC2A6Q9UGQ3 507 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ZNF229Q9UJW7 825 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 GGA2Q9UJY4 613 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 DDX19BQ9UMR2 479 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 GAB2Q9UQC2 676 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 ERVW-1Q9UQF0 538 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 USP6P35125 1406 aa3.17□□□□□ -1.9
PMS1-216ENST00000447734 PRSS37A4D1T9 235 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 ARHGEF33A8MVX0 844 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 SULT2B1O00204 365 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 DYNC1I1O14576 645 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 SOX15O60248 233 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 FGF17O60258 216 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 NIPSNAP2O75323 286 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 CDK14O94921 469 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 FARS2O95363 451 aaKnown RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 ETHE1O95571 254 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 CD55P08174 381 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 SNRPCP09234 159 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms