RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SH3BGRLO75368 114 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 TIMP1P01033 207 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 ZNF14P17017 642 aaPredicted RBP17.7■□□□□ 0.42
HMGA1-205ENST00000447654 OC90Q02509 493 aaPredicted RBP17.7■□□□□ 0.42
HMGA1-205ENST00000447654 TMEM244Q5VVB8 128 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 DMKNQ6E0U4 476 aaPredicted RBP17.7■□□□□ 0.42
HMGA1-205ENST00000447654 C6orf120Q7Z4R8 191 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 GTPBP8Q8N3Z3 284 aaPredicted RBP17.7■□□□□ 0.42
HMGA1-205ENST00000447654 CHST14Q8NCH0 376 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 NEU1Q99519 415 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 SSX3Q99909 188 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 C2orf88Q9BSF0 95 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 PINK1Q9BXM7 581 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 WDR13Q9H1Z4 485 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 SGK2Q9HBY8 427 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 DZANK1Q9NVP4 752 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 TAS2R8Q9NYW2 309 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 CBY1Q9Y3M2 126 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 PIKFYVEQ9Y2I7 2098 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 DAPL1A0PJW8 107 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 FAM86C2PA6NEL3 165 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 CTSAP10619 480 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 XPAP23025 273 aaPredicted RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 NSG1P42857 185 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 SLC7A9P82251 487 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 PJVKQ0ZLH3 352 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 TMEM115Q12893 351 aaPredicted RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 ERV3-1Q14264 604 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 PGGHGQ32M88 737 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 VWA2Q5GFL6 755 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 ASTLQ6HA08 431 aaPredicted RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 FAM71E1Q6IPT2 247 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 FAM199XQ6PEV8 388 aaPredicted RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 KLHDC8AQ8IYD2 350 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 XAGE5Q8WWM1 108 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 MYLIPQ8WY64 445 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 CLP1Q92989 425 aaKnown RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 ELF4Q99607 663 aaPredicted RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 NRIP2Q9BQI9 281 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 TREM1Q9NP99 234 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 IL26Q9NPH9 171 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 MIEF1Q9NQG6 463 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 SZT2Q5T011 3432 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 GGT3PA6NGU5 568 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 LEFTY2O00292 366 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 CCL16O15467 120 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 ETHE1O95571 254 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 C8AP07357 584 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 ALPPL2P10696 532 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 APEHP13798 732 aaKnown RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 NFYBP25208 207 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 PTH2RP49190 550 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 AKR7LQ8NHP1 331 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 CCDC107Q8WV48 283 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 RNF141Q8WVD5 230 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 RAB3CQ96E17 227 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 S100A16Q96FQ6 103 aaKnown RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 LMLNQ96KR4 655 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 VRK1Q99986 396 aaPredicted RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 MESP1Q9BRJ9 268 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 RSPO3Q9BXY4 272 aaPredicted RBP17.69■□□□□ 0.42
HMGA1-205ENST00000447654 C1orf198Q9H425 327 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 SEC61A2Q9H9S3 476 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 KLK11Q9UBX7 282 aa17.69■□□□□ 0.42
HMGA1-205ENST00000447654 TMEM272A0A1B0GTI8 110 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 HIDE1A8MVS5 230 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 OR2T1O43869 369 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 CD1AP06126 327 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 MELTFP08582 738 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 UCHL1P09936 223 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 EPCAMP16422 314 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 SDHAP31040 664 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 POU3F4P49335 361 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 P2RX1P51575 399 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 ZNF239Q16600 458 aaKnown RBP17.68■□□□□ 0.42
HMGA1-205ENST00000447654 ZCCHC12Q6PEW1 402 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 IZUMO1Q8IYV9 350 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 OR51G2Q8NGK0 314 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 OR6T1Q8NGN1 323 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 C14orf79Q96F83 325 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 MAP3K3Q99759 626 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 ZFYVE1Q9HBF4 777 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 GFOD1Q9NXC2 390 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 GDE1Q9NZC3 331 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 CRLS1Q9UJA2 301 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 FBXL4Q9UKA2 621 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 NINQ8N4C6 2090 aa17.68■□□□□ 0.42
HMGA1-205ENST00000447654 OR2W5A6NFC9 320 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 OR6C76A6NM76 312 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 SYT5O00445 386 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 FMO6PO60774 539 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 NT5EP21589 574 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 AKR1C2P52895 323 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 NUBP1P53384 320 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 NAAAQ02083 359 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 AKR1C1Q04828 323 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 DRAM2Q6UX65 266 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 RFLNAQ6ZTI6 216 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 BEST3Q8N1M1 668 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 ARRDC1Q8N5I2 433 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms