RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 DUSP7Q16829 419 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 TRMT5Q32P41 509 aaKnown RBP13.02□□□□□ -0.33
USE1-202ENST00000445667 RABL3Q5HYI8 236 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 REP15Q6BDI9 236 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 TMEM225Q6GV28 225 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 ZNF704Q6ZNC4 412 aaPredicted RBP13.02□□□□□ -0.33
USE1-202ENST00000445667 NET1Q7Z628 596 aaPredicted RBP13.02□□□□□ -0.33
USE1-202ENST00000445667 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 P3H2Q8IVL5 708 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 LSMEM1Q8N8F7 131 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 OR9K2Q8NGE7 335 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 RNF217Q8TC41 542 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 LRRC58Q96CX6 371 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 KTI12Q96EK9 354 aaPredicted RBP13.02□□□□□ -0.33
USE1-202ENST00000445667 PTDSS2Q9BVG9 487 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 TRIM2Q9C040 744 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 PARPBPQ9NWS1 579 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 SLC13A4Q9UKG4 626 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 SLC9A8Q9Y2E8 581 aa13.02□□□□□ -0.33
USE1-202ENST00000445667 CIB4A0PJX0 185 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 FTCDNL1E5RQL4 147 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 M0R3H8 397 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 FXYD1O00168 92 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 RAD51DO75771 328 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 GGT1P19440 569 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 CBLP22681 906 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 NR1H2P55055 460 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 NCALDP61601 193 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 OR1Q1Q15612 314 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 ALG10BQ5I7T1 473 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 TSPO2Q5TGU0 170 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 SEZ6L2Q6UXD5 910 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 AAED1Q7RTV5 226 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 KDM8Q8N371 416 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 BHLHE22Q8NFJ8 381 aaPredicted RBP13.01□□□□□ -0.33
USE1-202ENST00000445667 GPR32P1Q8NGA4 272 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 MFSD8Q8NHS3 518 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 C10orf82Q8WW14 230 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 DNAJA4Q8WW22 397 aaPredicted RBP13.01□□□□□ -0.33
USE1-202ENST00000445667 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 ZNF317Q96PQ6 595 aaPredicted RBP13.01□□□□□ -0.33
USE1-202ENST00000445667 SF3B5Q9BWJ5 86 aaKnown RBP13.01□□□□□ -0.33
USE1-202ENST00000445667 TMEM27Q9HBJ8 222 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 SLC7A10Q9NS82 523 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 ASB6Q9NWX5 421 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 ARMCX1Q9P291 453 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 KLHL14Q9P2G3 628 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 UPB1Q9UBR1 384 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 SEC14L4Q9UDX3 406 aa13.01□□□□□ -0.33
USE1-202ENST00000445667 PRR14LQ5THK1 2151 aa13□□□□□ -0.33
USE1-202ENST00000445667 IGKV1D-42A0A075B6H8 117 aa13□□□□□ -0.33
USE1-202ENST00000445667 A0A1W2PR80 420 aa13□□□□□ -0.33
USE1-202ENST00000445667 LGI1O95970 557 aa13□□□□□ -0.33
USE1-202ENST00000445667 PNMTP11086 282 aa13□□□□□ -0.33
USE1-202ENST00000445667 PTNP21246 168 aa13□□□□□ -0.33
USE1-202ENST00000445667 PCGF2P35227 344 aa13□□□□□ -0.33
USE1-202ENST00000445667 PPA1Q15181 289 aa13□□□□□ -0.33
USE1-202ENST00000445667 MAPRE2Q15555 327 aa13□□□□□ -0.33
USE1-202ENST00000445667 VMACQ2NL98 169 aa13□□□□□ -0.33
USE1-202ENST00000445667 TIMM23BQ5SRD1 257 aa13□□□□□ -0.33
USE1-202ENST00000445667 NCMAPQ5T1S8 102 aa13□□□□□ -0.33
USE1-202ENST00000445667 ULK3Q6PHR2 472 aa13□□□□□ -0.33
USE1-202ENST00000445667 C6orf89Q6UWU4 347 aa13□□□□□ -0.33
USE1-202ENST00000445667 CREB3L2Q70SY1 520 aa13□□□□□ -0.33
USE1-202ENST00000445667 TGIF2LYQ8IUE0 185 aa13□□□□□ -0.33
USE1-202ENST00000445667 SLC38A4Q969I6 547 aa13□□□□□ -0.33
USE1-202ENST00000445667 TMEM45BQ96B21 275 aa13□□□□□ -0.33
USE1-202ENST00000445667 MUCL1Q96DR8 90 aa13□□□□□ -0.33
USE1-202ENST00000445667 SLC47A1Q96FL8 570 aa13□□□□□ -0.33
USE1-202ENST00000445667 MCHR1Q99705 422 aa13□□□□□ -0.33
USE1-202ENST00000445667 ARHGDIGQ99819 225 aa13□□□□□ -0.33
USE1-202ENST00000445667 USB1Q9BQ65 265 aaKnown RBP13□□□□□ -0.33
USE1-202ENST00000445667 ECSITQ9BQ95 431 aa13□□□□□ -0.33
USE1-202ENST00000445667 TMEM204Q9BSN7 226 aa13□□□□□ -0.33
USE1-202ENST00000445667 C12orf10Q9HB07 376 aa13□□□□□ -0.33
USE1-202ENST00000445667 NGBQ9NPG2 151 aa13□□□□□ -0.33
USE1-202ENST00000445667 MRGBPQ9NV56 204 aa13□□□□□ -0.33
USE1-202ENST00000445667 BEX4Q9NWD9 120 aaPredicted RBP13□□□□□ -0.33
USE1-202ENST00000445667 MALT1Q9UDY8 824 aa13□□□□□ -0.33
USE1-202ENST00000445667 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
USE1-202ENST00000445667 USP22Q9UPT9 525 aa13□□□□□ -0.33
USE1-202ENST00000445667 HIVEP1P15822 2718 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 A0A087WUJ7 227 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 A0A0B4J2E0 115 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 A0A1B0GX12 115 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 DPRXA6NFQ7 191 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 OR5H1A6NKK0 313 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 CLOCKO15516 846 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 ATP8B1O43520 1251 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 ITGA5P08648 1049 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 CD247P20963 164 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 CDH12P55289 794 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 ADAM8P78325 824 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 NRF1Q16656 503 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 COQ5Q5HYK3 327 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 FAM91A1Q658Y4 838 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms