RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PTDSS2Q9BVG9 487 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 TMEM120AQ9BXJ8 343 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 TRIM2Q9C040 744 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 CCDC134Q9H6E4 229 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 FANCFQ9NPI8 374 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 SLC7A10Q9NS82 523 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 EMC3Q9P0I2 261 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 MALT1Q9UDY8 824 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 LEF1Q9UJU2 399 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-203ENST00000444440 RNF115Q9Y4L5 304 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 GMEB1Q9Y692 573 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 FN1P02751 2386 aaKnown RBP9.57□□□□□ -0.88
SF3A1-203ENST00000444440 DNHD1Q96M86 4753 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 OR5H1A6NKK0 313 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 AQP7P3A6NL99 342 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 SHISA9B4DS77 424 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 C5orf58C9J3I9 102 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 FTCDNL1E5RQL4 147 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 H7C1Q1 480 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 ANGPT2O15123 496 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 TPST2O60704 377 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 UQCRBP14927 111 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 GGT1P19440 569 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 CXCR1P25024 350 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 FKBP2P26885 142 aaKnown RBP9.56□□□□□ -0.88
SF3A1-203ENST00000444440 IDUAP35475 653 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 MDH1P40925 334 aaKnown RBP9.56□□□□□ -0.88
SF3A1-203ENST00000444440 GUCY1A3Q02108 690 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 GABRA6Q16445 453 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF672Q499Z4 452 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-203ENST00000444440 TIMM23BQ5SRD1 257 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 GCNT6Q5T4J0 391 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 C1orf140Q5VVS0 124 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 PRAMEF8Q5VWM4 474 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 PRAMEF7Q5VXH5 474 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 CASP12Q6UXS9 341 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 LINGO2Q7L985 606 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 PTOV1Q86YD1 416 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 UBE2J2Q8N2K1 259 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 WDR31Q8NA23 367 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 OR9K2Q8NGE7 335 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 BBS10Q8TAM1 723 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 C18orf12Q96KH6 178 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 COX4I2Q96KJ9 171 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 GSX2Q9BZM3 304 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF701Q9NV72 531 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-203ENST00000444440 FGFR1OP2Q9NVK5 253 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 ADPRHL2Q9NX46 363 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-203ENST00000444440 LAMP3Q9UQV4 416 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 IFT52Q9Y366 437 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 NDUFAF1Q9Y375 327 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 MAGED1Q9Y5V3 778 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-203ENST00000444440 SLC25A15Q9Y619 301 aa9.56□□□□□ -0.88
SF3A1-203ENST00000444440 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 IGKV1D-42A0A075B6H8 117 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 A8MVM7 634 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 OVOL3O00110 214 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 GPR171O14626 319 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 EIF1BO60739 113 aaKnown RBP9.55□□□□□ -0.88
SF3A1-203ENST00000444440 NDUFS7O75251 213 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 MRPL33O75394 65 aaKnown RBP9.55□□□□□ -0.88
SF3A1-203ENST00000444440 CNOT4O95628 575 aaKnown RBP9.55□□□□□ -0.88
SF3A1-203ENST00000444440 CD8AP01732 235 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 GPIP06744 558 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 CD3EP07766 207 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 INHBBP09529 407 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 FOSL1P15407 271 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 PAX1P15863 534 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 GPX2P18283 190 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 PTNP21246 168 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 AQP1P29972 269 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 CDKN1AP38936 164 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 RPS5P46782 204 aaKnown RBP9.55□□□□□ -0.88
SF3A1-203ENST00000444440 CDK6Q00534 326 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 DMTNQ08495 405 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 RUNDC3AQ59EK9 446 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 CGB2Q6NT52 195 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 B3GLCTQ6Y288 498 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 KRT73Q86Y46 540 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 KDM8Q8N371 416 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 TMEM171Q8WVE6 324 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 KTI12Q96EK9 354 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-203ENST00000444440 AMBRA1Q9C0C7 1298 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 ESRP2Q9H6T0 727 aaKnown RBP9.55□□□□□ -0.88
SF3A1-203ENST00000444440 ASB6Q9NWX5 421 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 TAS2R16Q9NYV7 291 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 SLC9A8Q9Y2E8 581 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 NAV3Q8IVL0 2385 aa9.55□□□□□ -0.88
SF3A1-203ENST00000444440 A0A1B0GWA3 101 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 CIB4A0PJX0 185 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 CCT8L1PA6NM43 557 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 ABCD4O14678 606 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 FZD7O75084 574 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 LY6G6DO95868 133 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 PNMTP11086 282 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 ETS2P15036 469 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 PRKAR1BP31321 381 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 SELENOPP49908 381 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms